AAH73203 (Xenopus laevis)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		AAH73203 T07732_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM4
M109_0.6 		Homo sapiens GCGCGSG RNAcompete
Ray et al.(2013)
RNCMPT00113 		0.708
RBM4
M050_0.6 		Homo sapiens GCGCGSS RNAcompete
Ray et al.(2013)
RNCMPT00052 		0.708
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH73203 RRM 4 66
AAH73203 RRM 80 142
AAH73203 CCHC ZF 160 177

Links

Other CCHC ZF,RRM family RBPs
Other Xenopus laevis RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH82645 Xenopus laevis AAH82645 I 0.938
rbm4b Xenopus tropicalis ENSXETG00000026649 I 0.931
ENSDORG00000004538 Dipodomys ordii ENSDORG00000004538 I 0.715
ENSOPRG00000009149 Ochotona princeps ENSOPRG00000009149 I 0.708
RBM4B Otolemur garnettii ENSOGAG00000015648 I 0.708
RBM4B Ochotona princeps ENSOPRG00000009158 I 0.708
RBM4B Procavia capensis ENSPCAG00000003414 I 0.708
ENSPPYG00000003010 Pongo pygmaeus ENSPPYG00000003010 I 0.708
RBM4_RABIT Oryctolagus cuniculus ENSOCUG00000006695 I 0.708
ENSOANG00000011036 Ornithorhynchus anatinus ENSOANG00000011036 I 0.708
Rbm4b Mus musculus ENSMUSG00000033760 I 0.708
ENSMODG00000008056 Monodelphis domestica ENSMODG00000008056 I 0.708
ENSMUSG00000056951 Mus musculus ENSMUSG00000056951 I 0.708
ENSOANG00000003143 Ornithorhynchus anatinus ENSOANG00000003143 I 0.708
XR_022144.1 Pan troglodytes ENSPTRG00000003934 I 0.708
ENSOCUG00000004731 Oryctolagus cuniculus ENSOCUG00000004731 I 0.708
ENSPVAG00000010486 Pteropus vampyrus ENSPVAG00000010486 I 0.708
RBM4B Tursiops truncatus ENSTTRG00000011166 I 0.708
ENSTTRG00000011164 Tursiops truncatus ENSTTRG00000011164 I 0.708
ENSVPAG00000001949 Vicugna pacos ENSVPAG00000001949 I 0.708
Ame_R016449 Ailuropoda melanoleuca Ame_R016449 I 0.708
Ame_R016450 Ailuropoda melanoleuca Ame_R016450 I 0.708
RBM4B Tupaia belangeri ENSTBEG00000003748 I 0.708
RBM4B Spermophilus tridecemlineatus ENSSTOG00000011226 I 0.708
RBM4B Pteropus vampyrus ENSPVAG00000010487 I 0.708
XM_001364763.1 Monodelphis domestica ENSMODG00000008047 I 0.708
Rbm4b Rattus norvegicus ENSRNOG00000019650 I 0.708
RBM4B Sorex araneus ENSSARG00000010710 I 0.708
ENSSSCG00000012938 Sus scrofa ENSSSCG00000012938 I 0.708
RBM4B Pan troglodytes ENSPTRG00000003935 I 0.708
RBM4 Macaca mulatta ENSMMUG00000020363 I 0.708
RBM4B Choloepus hoffmanni ENSCHOG00000002892 I 0.708
ENSCAFG00000012388 Canis familiaris ENSCAFG00000012388 I 0.708
ENSCPOG00000013194 Cavia porcellus ENSCPOG00000013194 I 0.708
RBM4B Cavia porcellus ENSCPOG00000013689 I 0.708
LOC100058690 Equus caballus ENSECAG00000022940 I 0.708
RBM4B Dasypus novemcinctus ENSDNOG00000019500 I 0.708
RBM4B Canis familiaris ENSCAFG00000012378 I 0.708
RBM4_BOVIN Bos taurus ENSBTAG00000031688 I 0.708
RBM4 Homo sapiens ENSG00000239306 D 0.708
A6MLC8_CALJA Callithrix jacchus ENSCJAG00000001294 I 0.708
Rbm4 Rattus norvegicus ENSRNOG00000019669 I 0.708
RBM4B Anolis carolinensis ENSACAG00000007777 I 0.708
Q2KIV3_BOVIN Bos taurus ENSBTAG00000000423 I 0.708
LOC713553 Macaca mulatta ENSMMUG00000010577 I 0.708
LOC100058729 Equus caballus ENSECAG00000022987 I 0.708
ENSGGOG00000014455 Gorilla gorilla ENSGGOG00000014455 I 0.708
RBM4B Loxodonta africana ENSLAFG00000002285 I 0.708
ENSLAFG00000028147 Loxodonta africana ENSLAFG00000028147 I 0.708
ENSMICG00000003817 Microcebus murinus ENSMICG00000003817 I 0.708
RBM4B Microcebus murinus ENSMICG00000003820 I 0.708
RBM4B Gorilla gorilla ENSGGOG00000011698 I 0.708
ENSFCAG00000007393 Felis catus ENSFCAG00000007393 I 0.708
RBM4B Felis catus ENSFCAG00000007394 I 0.708
RBM4B Homo sapiens ENSG00000173914 I 0.708
RBM4 Homo sapiens ENSG00000173933 I 0.708
ENSMEUG00000001445 Macropus eugenii ENSMEUG00000001445 I 0.701
ENSOGAG00000015647 Otolemur garnettii ENSOGAG00000015647 I 0.701
RBM4B Erinaceus europaeus ENSEEUG00000000058 I 0.701
RBM4B Vicugna pacos ENSVPAG00000001950 I 0.701