CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TEQG_01206
(
Trichophyton equinum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
TEQG_01206
T17859_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TEQG_01206T0
KH
282
350
ELSTHFLVCGRTRKNIKMIEATTNTAIYFPPPFPRVYGYMPPGATRRCEDEVYITGNNQEDINLVKQKL
TEQG_01206T0
KH
453
489
TMLSDICANSGADVTFDNLTFHIHGSDDSVKAAMMVI
TEQG_01206T0
KH
503
565
KVKIELANEHKEFVSGKKNGKINKIMSQIVGNVQIIFDGFNEYNFYIDVCANDYEAVKQGLHL
TEQG_01206T0
KH
573
647
SISFHVPDQYHKRIIGIGGQHIQRVMKKYSVFVKFSNAMDRGGAGKDDDDGRVENVICRTPARNAQNLELVKQEI
TEQG_01206T0
KH
678
719
KDIDELEKKWNCKIDFPSTETASDLVTISGPEYQVPQAVDAF
Links
Other
KH
family RBPs
Other
Trichophyton equinum
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TESG_05929
Trichophyton tonsurans
TESG_05929
N
0.986
TERG_04920
Trichophyton rubrum
TERG_04920
N
0.986
MGYG_03096
Microsporum gypseum
MGYG_03096
N
0.965
MCYG_03492
Microsporum canis
MCYG_03492
N
0.896
BDBG_03236
Blastomyces dermatitidis
BDBG_03236
N
0.802
ACLA_074000
Aspergillus clavatus
CADACLAG00007261
N
0.800
UREG_06534
Uncinocarpus reesii
UREG_06534
N
0.796
HCAG_05999
Histoplasma capsulatum
HCAG_05999
N
0.767
fgenesh1_pg.00866_#_126
Aspergillus carbonarius
fgenesh1_pg.00866_#_126
N
0.762
ATEG_01323
Aspergillus terreus
CADATEAG00002653
N
0.753
Pc12g11760
Penicillium chrysogenum
Pc12g11760
N
0.735
estExt_Genewise1Plus.C_210177
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_210177
N
0.700