CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_05929
(
Trichophyton tonsurans
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
TESG_05929
T17879_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_05929T0
KH
344
412
ELSTHFLVCGRTRKNIKMIEATTNTAIYFPPPFPRVYGYMPPGATRRCEDEVYITGNNQEDINLVKQKL
TESG_05929T0
KH
515
551
TMLSDICANSGADVTFDNLTFHIHGSDDSVKAAMMVI
TESG_05929T0
KH
565
626
KVKIELANEHKEFVSGKKNGKINKIMSQRNVQIIFDGFNEYNFYIDVCANDYEAVKQGLHLV
TESG_05929T0
KH
633
707
SISFHVPDQYHKRIIGIGGQHIQRVMKKYSVFVKFSNAMDRGGAGKDDDDGRVENVICRTPARNAQNLELVKQEI
TESG_05929T0
KH
738
779
KDIDELEKKWNCKIDFPSTETASDLVTISGPEYQVPQAVDAF
Links
Other
KH
family RBPs
Other
Trichophyton tonsurans
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TERG_04920
Trichophyton rubrum
TERG_04920
N
1.000
TEQG_01206
Trichophyton equinum
TEQG_01206
N
0.986
MGYG_03096
Microsporum gypseum
MGYG_03096
N
0.979
MCYG_03492
Microsporum canis
MCYG_03492
N
0.908
ACLA_074000
Aspergillus clavatus
CADACLAG00007261
N
0.809
BDBG_03236
Blastomyces dermatitidis
BDBG_03236
N
0.805
UREG_06534
Uncinocarpus reesii
UREG_06534
N
0.799
fgenesh1_pg.00866_#_126
Aspergillus carbonarius
fgenesh1_pg.00866_#_126
N
0.770
HCAG_05999
Histoplasma capsulatum
HCAG_05999
N
0.770
ATEG_01323
Aspergillus terreus
CADATEAG00002653
N
0.761
Pc12g11760
Penicillium chrysogenum
Pc12g11760
N
0.743
estExt_Genewise1Plus.C_210177
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_210177
N
0.708