PASA_GEN_0400107 (Daphnia pulex)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 PASA_GEN_0400107 T21325_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PASA_GEN_0400107 KH 139 195

Links

Other KH family RBPs
Other Daphnia pulex RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KRR1 Oryzias latipes ENSORLG00000019616 N 0.825
nasonia_NCBI_hmm386444 Nasonia vitripennis nasonia_NCBI_hmm386444 N 0.789
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 0.772
AAH72210 Xenopus laevis AAH72210 N 0.772
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.772
estExt_Genewise1Plus.C_20668 Chlorella vulgaris estExt_Genewise1Plus.C_20668 N 0.772
ANIA_05875 Aspergillus nidulans CADANIAG00007161 N 0.772
amel4_ncbi_hmm4445 Apis mellifera amel4_ncbi_hmm4445 N 0.759
GSTUMT00008009001 Tuber melanosporum GSTUMT00008009001 N 0.759
AAH41273 Xenopus laevis AAH41273 N 0.759
An02g03350 Aspergillus niger CADANGAG00001848 N 0.754
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.754
DGIL_AUG5s1009g5t1 Acyrtosiphon pisum DGIL_AUG5s1009g5t1 N 0.754
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.754
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.754
GF14827 Drosophila ananassae FBgn0091854 N 0.741
KRR1 Homo sapiens ENSG00000111615 N 0.737
KRR1 Gorilla gorilla ENSGGOG00000013596 N 0.737
KRR1 Felis catus ENSFCAG00000005207 N 0.737
KRR1 Saccharomyces cerevisiae YCL059C N 0.737
KRR1 Macropus eugenii ENSMEUG00000011365 N 0.737
KRR1 Dasypus novemcinctus ENSDNOG00000015614 N 0.737
KRR1 Cavia porcellus ENSCPOG00000014353 N 0.737
Krr1 Dipodomys ordii ENSDORG00000004614 N 0.737
KRR1 Macaca mulatta ENSMMUG00000009640 N 0.737
XR_025480.1 Pan troglodytes ENSPTRG00000005238 N 0.737
ENSPPYG00000004785 Pongo pygmaeus ENSPPYG00000004785 N 0.737
KRR1 Pteropus vampyrus ENSPVAG00000000529 N 0.737
KRR1 Sorex araneus ENSSARG00000009967 N 0.737
KRR1 Spermophilus tridecemlineatus ENSSTOG00000003620 N 0.737
KRR1 Sus scrofa ENSSSCG00000000520 N 0.737
KRR1 Tarsius syrichta ENSTSYG00000009394 N 0.737
KRR1 Ochotona princeps ENSOPRG00000011858 N 0.737
KRR1 Oryctolagus cuniculus ENSOCUG00000003925 N 0.737
KRR1 Monodelphis domestica ENSMODG00000020451 N 0.737
KRR1 Otolemur garnettii ENSOGAG00000010313 N 0.737
KRR1 Tursiops truncatus ENSTTRG00000001661 N 0.737
LOC100407700 Callithrix jacchus ENSCJAG00000001181 N 0.737
KRR1 Tupaia belangeri ENSTBEG00000008145 N 0.737
LOC100050169 Equus caballus ENSECAG00000017498 N 0.737
CLUG_04903 Candida lusitaniae CLUG_04903 N 0.737
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.737
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.737
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.737
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.737
KRR1 Choloepus hoffmanni ENSCHOG00000009636 N 0.737
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.737
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.737
KRR1_BOVIN Bos taurus ENSBTAG00000011591 N 0.737
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.737
Kwal_13011 Kluyveromyces waltii Kwal_13011 N 0.719
Ame_R008803 Ailuropoda melanoleuca Ame_R008803 N 0.719
dbe Drosophila melanogaster FBgn0020305 N 0.719
GI18007 Drosophila mojavensis FBgn0140747 N 0.719
GK24616 Drosophila willistoni FBgn0226576 N 0.719
GE15854 Drosophila yakuba FBgn0233416 N 0.719
e_gw1.35.542.1 Selaginella moellendorfii e_gw1.35.542.1 N 0.719
GJ19628 Drosophila virilis FBgn0206770 N 0.719
GL18627 Drosophila persimilis FBgn0156228 N 0.719
GG24622 Drosophila erecta FBgn0116754 N 0.719
XP_001186312.1 Strongylocentrotus purpuratus XP_001186312.1 N 0.719
GA18062-RA Drosophila pseudoobscura FBgn0078070 N 0.719
Hrb2 Rattus norvegicus ENSRNOG00000004035 N 0.719
PTSG_07198 Salpingoeca rosetta PTSG_07198 N 0.719
KRR1 Gasterosteus aculeatus ENSGACG00000019481 N 0.719
XP_786725.1 Strongylocentrotus purpuratus XP_786725.1 N 0.719
KRR1 Erinaceus europaeus ENSEEUG00000001466 N 0.719
AGAP007912 Anopheles gambiae AGAP007912 N 0.719
XM_846783.1 Canis familiaris ENSCAFG00000005665 N 0.719
KRR1 Danio rerio ENSDARG00000011246 N 0.719
FVEG_06170 Fusarium verticillioides FVEG_06170 N 0.719
KRR1 Loxodonta africana ENSLAFG00000015986 N 0.719
ZYRO0F18458g Zygosaccharomyces rouxii ZYRO0F18458g N 0.719
Krr1 Mus musculus ENSMUSG00000063334 N 0.719
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.702
e_gw1.1.604.1 Mucor circinelloides e_gw1.1.604.1 N 0.702
CPAG_00706 Candida parapsilosis CPAG_00706 N 0.702
e_gwh1.2.1.2136.1 Pichia stipitis e_gwh1.2.1.2136.1 N 0.702
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.702
PMAA_048600 Penicillium marneffei PMAA_048600 N 0.702
KRR1 Vicugna pacos ENSVPAG00000011750 N 0.702
KRR1 Meleagris gallopavo ENSMGAG00000010844 N 0.702
A7TFC5_VANPO Vanderwaltozyma polyspora A7TFC5_VANPO N 0.702
KRR1 Takifugu rubripes ENSTRUG00000004380 N 0.702
CTRG_04103 Candida tropicalis CTRG_04103 N 0.702
LELG_00899 Lodderomyces elongisporus LELG_00899 N 0.702
Q5ZKE0_CHICK Gallus gallus ENSGALG00000010227 N 0.702
KRR1 Candida albicans orf19.661 N 0.702
Cd36_10710 Candida dubliniensis Cd36_10710 N 0.702
estExt_Genewise1Plus.C_20041 Sporobolomyces roseus estExt_Genewise1Plus.C_20041 N 0.702
KLTH0F00506g Kluyveromyces thermotolerans KLTH0F00506g N 0.700