cassava18108.valid.m1 (Manihot esculenta)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 cassava18108.valid.m1 T20657_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava18108.valid.m1 KH 89 154
cassava18108.valid.m1 KH 183 249

Links

Other KH family RBPs
Other Manihot esculenta RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava29872.valid.m1 Manihot esculenta cassava29872.valid.m1 N 0.940
29780.m001319 Ricinus communis 29780.m001319 N 0.917
ppa002757m Prunus persica ppa002757m N 0.782
PK09389.1 Cannabis sativa PK09389.1 N 0.774
Cucsa.220100 Cucumis sativus Cucsa.220100 N 0.759
MDP0000142384 Malus x domestica MDP0000142384 N 0.744
GSVIVG00035354001 Vitis vinifera GSVIVG00035354001 N 0.737
MDP0000301141 Malus x domestica MDP0000301141 N 0.737
PK01594.1 Cannabis sativa PK01594.1 N 0.729
Cucsa.395190 Cucumis sativus Cucsa.395190 N 0.729
mgf005239m Mimulus guttatus mgf005239m N 0.722
Glyma06g05400.1 Glycine max Glyma06g05400.1 N 0.722
BRADI3G08410 Brachypodium distachyon BRADI3G08410 N 0.714
B9INI7_POPTR Populus trichocarpa POPTR_0018s05020 N 0.707
cassava30216.valid.m1 Manihot esculenta cassava30216.valid.m1 N 0.707
cassava30219.valid.m1 Manihot esculenta cassava30219.valid.m1 N 0.707
mgf008502m Mimulus guttatus mgf008502m N 0.707
PDK_20s1621601g001 Phoenix dactylifera PDK_20s1621601g001 N 0.707
cassava30217.valid.m1 Manihot esculenta cassava30217.valid.m1 N 0.707