MDP0000301141 (Malus x domestica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 MDP0000301141 T21844_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000301141 KH 86 151
MDP0000301141 KH 213 279

Links

Other KH family RBPs
Other Malus x domestica RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000142384 Malus x domestica MDP0000142384 N 0.977
ppa002757m Prunus persica ppa002757m N 0.895
PK09389.1 Cannabis sativa PK09389.1 N 0.820
Cucsa.220100 Cucumis sativus Cucsa.220100 N 0.774
cassava29872.valid.m1 Manihot esculenta cassava29872.valid.m1 N 0.752
LOC_Os02g13130 Oryza sativa LOC_Os02g13130 N 0.744
GSVIVG00035354001 Vitis vinifera GSVIVG00035354001 N 0.744
BGIOSIBCE006191 Oryza indica BGIOSIBCE006191 N 0.744
GRMZM2G177781 Zea mays GRMZM2G177781 N 0.737
cassava18108.valid.m1 Manihot esculenta cassava18108.valid.m1 N 0.737
cassava30216.valid.m1 Manihot esculenta cassava30216.valid.m1 N 0.737
mgf005239m Mimulus guttatus mgf005239m N 0.737
Glyma06g05400.1 Glycine max Glyma06g05400.1 N 0.737
cassava30217.valid.m1 Manihot esculenta cassava30217.valid.m1 N 0.737
29780.m001319 Ricinus communis 29780.m001319 N 0.737
PK01594.1 Cannabis sativa PK01594.1 N 0.737
PDK_20s1621601g001 Phoenix dactylifera PDK_20s1621601g001 N 0.737
cassava30219.valid.m1 Manihot esculenta cassava30219.valid.m1 N 0.729
GRMZM2G162992 Zea mays GRMZM2G162992 N 0.729
AT2G25970 Arabidopsis thaliana AT2G25970-TAIR-G N 0.722
Cucsa.395190 Cucumis sativus Cucsa.395190 N 0.722
BRADI3G08410 Brachypodium distachyon BRADI3G08410 N 0.722
B9INI7_POPTR Populus trichocarpa POPTR_0018s05020 N 0.722
XM_002880683.1 Arabidopsis lyrata fgenesh2_kg.4__512__AT2G25970.1 N 0.722
SB04G007950 Sorghum bicolor Sb04g007950 N 0.714
mgf008502m Mimulus guttatus mgf008502m N 0.714
Medtr1g020830 Medicago truncatula Medtr1g020830 N 0.707
29794.m003342 Ricinus communis 29794.m003342 N 0.707
MDP0000302754 Malus x domestica MDP0000302754 N 0.707