GSVIVG00035354001 (Vitis vinifera)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 GSVIVG00035354001 T20109_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00035354001 KH 137 202
GSVIVT00035354001 KH 229 295

Links

Other KH family RBPs
Other Vitis vinifera RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cucsa.395190 Cucumis sativus Cucsa.395190 N 0.932
mgf005239m Mimulus guttatus mgf005239m N 0.917
PK01594.1 Cannabis sativa PK01594.1 N 0.917
cassava30216.valid.m1 Manihot esculenta cassava30216.valid.m1 N 0.902
cassava30219.valid.m1 Manihot esculenta cassava30219.valid.m1 N 0.902
cassava30217.valid.m1 Manihot esculenta cassava30217.valid.m1 N 0.902
29794.m003342 Ricinus communis 29794.m003342 N 0.887
ppa002323m Prunus persica ppa002323m N 0.880
Medtr1g020830 Medicago truncatula Medtr1g020830 N 0.880
mgf008502m Mimulus guttatus mgf008502m N 0.880
Glyma06g05400.1 Glycine max Glyma06g05400.1 N 0.880
B9INI7_POPTR Populus trichocarpa POPTR_0018s05020 N 0.872
PDK_20s1621601g001 Phoenix dactylifera PDK_20s1621601g001 N 0.872
AT2G25970 Arabidopsis thaliana AT2G25970-TAIR-G N 0.865
MDP0000222202 Malus x domestica MDP0000222202 N 0.865
Glyma14g10670.1 Glycine max Glyma14g10670.1 N 0.865
XM_002880683.1 Arabidopsis lyrata fgenesh2_kg.4__512__AT2G25970.1 N 0.865
Glyma17g34850.1 Glycine max Glyma17g34850.1 N 0.865
MDP0000302754 Malus x domestica MDP0000302754 N 0.850
Medtr3g140110 Medicago truncatula Medtr3g140110 N 0.842
Medtr3g140090 Medicago truncatula Medtr3g140090 N 0.842
LjSGA_026050.1 Lotus japonicus LjSGA_026050.1 N 0.835
Glyma04g05330.1 Glycine max Glyma04g05330.1 N 0.820
SB04G007950 Sorghum bicolor Sb04g007950 N 0.805
LOC_Os02g13130 Oryza sativa LOC_Os02g13130 N 0.805
BGIOSIBCE006191 Oryza indica BGIOSIBCE006191 N 0.805
GRMZM2G177781 Zea mays GRMZM2G177781 N 0.797
BRADI3G08410 Brachypodium distachyon BRADI3G08410 N 0.789
GRMZM2G162992 Zea mays GRMZM2G162992 N 0.789
MDP0000379391 Malus x domestica MDP0000379391 N 0.779
ppa002757m Prunus persica ppa002757m N 0.767
cassava29872.valid.m1 Manihot esculenta cassava29872.valid.m1 N 0.752
PK09389.1 Cannabis sativa PK09389.1 N 0.752
MDP0000142384 Malus x domestica MDP0000142384 N 0.744
MDP0000301141 Malus x domestica MDP0000301141 N 0.744
Cucsa.220100 Cucumis sativus Cucsa.220100 N 0.744
cassava18108.valid.m1 Manihot esculenta cassava18108.valid.m1 N 0.737
29780.m001319 Ricinus communis 29780.m001319 N 0.722