BRADI3G08410 (Brachypodium distachyon)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 BRADI3G08410 T18161_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G08410.1 KH 144 209
BRADI3G08410.1 KH 238 304

Links

Other KH family RBPs
Other Brachypodium distachyon RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os02g13130 Oryza sativa LOC_Os02g13130 N 0.857
BGIOSIBCE006191 Oryza indica BGIOSIBCE006191 N 0.857
AT2G25970 Arabidopsis thaliana AT2G25970-TAIR-G N 0.812
XM_002880683.1 Arabidopsis lyrata fgenesh2_kg.4__512__AT2G25970.1 N 0.812
Cucsa.395190 Cucumis sativus Cucsa.395190 N 0.812
GRMZM2G177781 Zea mays GRMZM2G177781 N 0.805
mgf005239m Mimulus guttatus mgf005239m N 0.805
cassava30219.valid.m1 Manihot esculenta cassava30219.valid.m1 N 0.797
Medtr3g140110 Medicago truncatula Medtr3g140110 N 0.797
PK01594.1 Cannabis sativa PK01594.1 N 0.797
Glyma06g05400.1 Glycine max Glyma06g05400.1 N 0.797
GRMZM2G162992 Zea mays GRMZM2G162992 N 0.789
Medtr3g140090 Medicago truncatula Medtr3g140090 N 0.789
SB04G007950 Sorghum bicolor Sb04g007950 N 0.789
GSVIVG00035354001 Vitis vinifera GSVIVG00035354001 N 0.789
PDK_20s1621601g001 Phoenix dactylifera PDK_20s1621601g001 N 0.789
cassava30216.valid.m1 Manihot esculenta cassava30216.valid.m1 N 0.789
cassava30217.valid.m1 Manihot esculenta cassava30217.valid.m1 N 0.789
MDP0000302754 Malus x domestica MDP0000302754 N 0.782
MDP0000222202 Malus x domestica MDP0000222202 N 0.782
LjSGA_026050.1 Lotus japonicus LjSGA_026050.1 N 0.782
Medtr1g020830 Medicago truncatula Medtr1g020830 N 0.774
ppa002323m Prunus persica ppa002323m N 0.774
Glyma14g10670.1 Glycine max Glyma14g10670.1 N 0.767
B9INI7_POPTR Populus trichocarpa POPTR_0018s05020 N 0.767
Glyma17g34850.1 Glycine max Glyma17g34850.1 N 0.767
mgf008502m Mimulus guttatus mgf008502m N 0.759
29794.m003342 Ricinus communis 29794.m003342 N 0.744
ppa002757m Prunus persica ppa002757m N 0.729
MDP0000142384 Malus x domestica MDP0000142384 N 0.729
cassava29872.valid.m1 Manihot esculenta cassava29872.valid.m1 N 0.722
MDP0000301141 Malus x domestica MDP0000301141 N 0.722
MDP0000379391 Malus x domestica MDP0000379391 N 0.717
cassava18108.valid.m1 Manihot esculenta cassava18108.valid.m1 N 0.714
Cucsa.220100 Cucumis sativus Cucsa.220100 N 0.714
Glyma04g05330.1 Glycine max Glyma04g05330.1 N 0.714
PK09389.1 Cannabis sativa PK09389.1 N 0.707