mgf008502m (Mimulus guttatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 mgf008502m T21292_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf008502m KH 123 188
mgf008502m KH 216 282

Links

Other KH family RBPs
Other Mimulus guttatus RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cucsa.395190 Cucumis sativus Cucsa.395190 N 0.902
GSVIVG00035354001 Vitis vinifera GSVIVG00035354001 N 0.880
mgf005239m Mimulus guttatus mgf005239m N 0.872
PDK_20s1621601g001 Phoenix dactylifera PDK_20s1621601g001 N 0.850
PK01594.1 Cannabis sativa PK01594.1 N 0.842
XM_002880683.1 Arabidopsis lyrata fgenesh2_kg.4__512__AT2G25970.1 N 0.842
AT2G25970 Arabidopsis thaliana AT2G25970-TAIR-G N 0.835
cassava30219.valid.m1 Manihot esculenta cassava30219.valid.m1 N 0.835
Medtr1g020830 Medicago truncatula Medtr1g020830 N 0.835
cassava30216.valid.m1 Manihot esculenta cassava30216.valid.m1 N 0.820
MDP0000222202 Malus x domestica MDP0000222202 N 0.820
29794.m003342 Ricinus communis 29794.m003342 N 0.820
cassava30217.valid.m1 Manihot esculenta cassava30217.valid.m1 N 0.820
MDP0000302754 Malus x domestica MDP0000302754 N 0.812
B9INI7_POPTR Populus trichocarpa POPTR_0018s05020 N 0.805
ppa002323m Prunus persica ppa002323m N 0.805
LOC_Os02g13130 Oryza sativa LOC_Os02g13130 N 0.789
Glyma06g05400.1 Glycine max Glyma06g05400.1 N 0.789
Glyma17g34850.1 Glycine max Glyma17g34850.1 N 0.789
BGIOSIBCE006191 Oryza indica BGIOSIBCE006191 N 0.789
Glyma14g10670.1 Glycine max Glyma14g10670.1 N 0.789
Medtr3g140110 Medicago truncatula Medtr3g140110 N 0.782
Medtr3g140090 Medicago truncatula Medtr3g140090 N 0.774
LjSGA_026050.1 Lotus japonicus LjSGA_026050.1 N 0.774
SB04G007950 Sorghum bicolor Sb04g007950 N 0.767
BRADI3G08410 Brachypodium distachyon BRADI3G08410 N 0.759
GRMZM2G162992 Zea mays GRMZM2G162992 N 0.752
GRMZM2G177781 Zea mays GRMZM2G177781 N 0.752
Glyma04g05330.1 Glycine max Glyma04g05330.1 N 0.752
MDP0000379391 Malus x domestica MDP0000379391 N 0.745
ppa002757m Prunus persica ppa002757m N 0.737
PK09389.1 Cannabis sativa PK09389.1 N 0.737
cassava29872.valid.m1 Manihot esculenta cassava29872.valid.m1 N 0.722
MDP0000142384 Malus x domestica MDP0000142384 N 0.714
MDP0000301141 Malus x domestica MDP0000301141 N 0.714
cassava18108.valid.m1 Manihot esculenta cassava18108.valid.m1 N 0.707
Cucsa.220100 Cucumis sativus Cucsa.220100 N 0.707