e_gw1.7.987.1 (Fragilariopsis cylindrus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 e_gw1.7.987.1 T20792_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.7.987.1 KH 152 202

Links

Other KH family RBPs
Other Fragilariopsis cylindrus RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PHATRDRAFT_45441 Phaeodactylum tricornutum Phatr45441 N 0.843
estExt_Genewise1Plus.C_20668 Chlorella vulgaris estExt_Genewise1Plus.C_20668 N 0.765
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 0.765
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.745
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.745
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.731
e_gw1.35.542.1 Selaginella moellendorfii e_gw1.35.542.1 N 0.731
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.725
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.725
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.725
Medtr5g094630 Medicago truncatula Medtr5g094630 N 0.725
KRR1 Saccharomyces cerevisiae YCL059C N 0.706
e_gw1.11.691.1 Mycosphaerella fijiensis e_gw1.11.691.1 N 0.706
THAPSDRAFT_268598 Thalassiosira pseudonana Thaps268598 N 0.706
CLUG_04903 Candida lusitaniae CLUG_04903 N 0.706
FGSG_06203 Fusarium graminearum FGSG_06203 N 0.706
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.706
BDBG_00628 Blastomyces dermatitidis BDBG_00628 N 0.706
A7TFC5_VANPO Vanderwaltozyma polyspora A7TFC5_VANPO N 0.706
estExt_Genewise1Plus.C_250151 Melampsora laricis populina estExt_Genewise1Plus.C_250151 N 0.706
estExt_Genewise1.C_80450 Myceliophthora thermophila estExt_Genewise1.C_80450 N 0.706
estExt_fgenesh2_pm.C_40064 Thielavia terrestris estExt_fgenesh2_pm.C_40064 N 0.706
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.706
PredSwiss_ASS2010_156.1 Pneumocystis carinii PredSwiss_ASS2010_156.1 N 0.706
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.706
estExt_fgenesh1_pg.C_chr_50346 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50346 N 0.706
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.706
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.706
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.706
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.706