CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSGGOG00000024907
(
Gorilla gorilla
)
KH,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
PF00076 (RRM_1)
IPR018111
IPR000504
ENSGGOG00000024907
T22221_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
IGF2BP2
M294_0.6
Homo sapiens
Sequence logo not available
CAU
PAR-clip
Cook et al.(2011)
356_20371350
0.916
IGF2BP2
M032_0.6
Homo sapiens
VMAHWCA
RNAcompete
Ray et al.(2013)
RNCMPT00033
0.916
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000023349
RRM
4
68
LFIGNLSPAVTAEDLRQLFGDRELPLAGQVLLKSRYAFVDYPDQNWAIRTIETPSGQVELHGKIM
ENSGGOP00000023349
RRM
83
150
IQIRNIPPHLQWEVLDGLLAQYGTVENVEQVNTDTETAVVNVTYATKEEVKIAMKKLIGHQFENYSFK
ENSGGOP00000023349
KH
186
249
PLRILVATQFVGAIIGKEGLTIKNITKQSQSRVDIYRQENSGAAEKPVTIHATPEWTSEACRMI
ENSGGOP00000023349
KH
267
332
PLKILAHNGLVGRLIGKEGRNLKKNEHETGTKITISSSQDLSIYNPERTVTVKGTVEVCASAEIEI
ENSGGOP00000023349
KH
377
438
IVNLFIPTQGVGAIIGKKGAHIKQLARFVGASIKIAPAEGPDQRKVIITWPPESQFKAQGRI
ENSGGOP00000023349
KH
457
521
ETHIRVPSSTAGQVIGKGGKTVNELQNLISAEVIVPRDQTPDENEEMIVRIIGHFFASQTAQRKI
Links
Other
KH,RRM
family RBPs
Other
Gorilla gorilla
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
IGF2BP2
Homo sapiens
ENSG00000073792
D
0.916
XR_025001.1
Pan troglodytes
ENSPTRG00000015705
I
0.916
IGF2BP2
Macaca mulatta
ENSMMUG00000023416
I
0.913
IGF2BP2
Oryctolagus cuniculus
ENSOCUG00000005057
I
0.908
Igf2bp2
Rattus norvegicus
ENSRNOG00000025946
I
0.891
Igf2bp2
Mus musculus
ENSMUSG00000033581
I
0.888
IGF2BP2
Pteropus vampyrus
ENSPVAG00000011494
I
0.857
igf2bp2a
Danio rerio
ENSDARG00000003421
I
0.802
IGF2BP2
Gasterosteus aculeatus
ENSGACG00000005991
I
0.786
LOC424865
Gallus gallus
ENSGALG00000006523
I
0.779
IGF2BP2
Oryzias latipes
ENSORLG00000016532
I
0.758
IGF2BP2
Takifugu rubripes
ENSTRUG00000009908
I
0.758
IGF2BP2
Tetraodon nigroviridis
ENSTNIG00000016472
I
0.746
AAI70477
Xenopus laevis
AAI70477
I
0.721
AAI70479
Xenopus laevis
AAI70479
I
0.721
AAI70224
Xenopus laevis
AAI70224
I
0.721
O73932
Xenopus laevis
O73932
I
0.721
AAC41285
Xenopus laevis
AAC41285
I
0.721
AAI70196
Xenopus laevis
AAI70196
I
0.721
igf2bp3
Xenopus tropicalis
ENSXETG00000007396
I
0.721
AAC18598
Xenopus laevis
AAC18598
I
0.721
AAB97457
Xenopus laevis
AAB97457
I
0.716
AAC18597
Xenopus laevis
AAC18597
I
0.716
AAH57700
Xenopus laevis
AAH57700
I
0.716
O57526
Xenopus laevis
O57526
I
0.716
IF2B3_CHICK
Gallus gallus
ENSGALG00000010961
I
0.713
IGF2BP1
Anolis carolinensis
ENSACAG00000006199
I
0.713
IGF2BP3
Taeniopygia guttata
ENSTGUG00000002773
I
0.713
IGF2BP3
Anolis carolinensis
ENSACAG00000013538
I
0.708
IF2B1_CHICK
Gallus gallus
ENSGALG00000001293
I
0.708