O57526 (Xenopus laevis)
KH,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1)
PF00076 (RRM_1) 		IPR018111
IPR000504 		O57526 T22339_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
IGF2BP3
M295_0.6 		Homo sapiens Sequence logo not available CAUU PAR-clip
Cook et al.(2011)
357_20371350 		0.883
IGF2BP3
M163_0.6 		Homo sapiens AMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00172 		0.883
IGF2BP1
M296_0.6 		Homo sapiens AAGCACCCGUU SELEX
Cook et al.(2011)
359_12507992 		0.832
IGF2BP1
M293_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
355_20371350 		0.832
IGF2BP2
M294_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
356_20371350 		0.779
IGF2BP2
M032_0.6 		Homo sapiens VMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00033 		0.779
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
O57526 RRM 4 69
O57526 RRM 83 150
O57526 KH 206 269
O57526 KH 287 352
O57526 KH 419 482
O57526 KH 501 565

Links

Other KH,RRM family RBPs
Other Xenopus laevis RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAB97457 Xenopus laevis AAB97457 I 1.000
AAC18597 Xenopus laevis AAC18597 I 1.000
AAH57700 Xenopus laevis AAH57700 I 1.000
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.992
AAC41285 Xenopus laevis AAC41285 I 0.985
AAI70479 Xenopus laevis AAI70479 I 0.985
O73932 Xenopus laevis O73932 I 0.985
AAC18598 Xenopus laevis AAC18598 I 0.985
AAI70196 Xenopus laevis AAI70196 I 0.985
AAI70477 Xenopus laevis AAI70477 I 0.985
AAI70224 Xenopus laevis AAI70224 I 0.985
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.952
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.952
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.952
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.927
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.891
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.886
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.883
IGF2BP3 Callithrix jacchus ENSCJAG00000001499 I 0.883
XR_022832.1 Pan troglodytes ENSPTRG00000018986 I 0.883
IGF2BP3 Homo sapiens ENSG00000136231 D 0.883
IGF2BP3 Macaca mulatta ENSMMUG00000004839 I 0.880
D3ZB84_RAT Rattus norvegicus ENSRNOG00000009052 I 0.873
Igf2bp3 Mus musculus ENSMUSG00000029814 I 0.873
IGF2BP3 Oryzias latipes ENSORLG00000004712 I 0.865
IGF2BP3 Microcebus murinus ENSMICG00000013683 I 0.863
igf2bp3 Danio rerio ENSDARG00000010266 I 0.862
IGF2BP1 Anolis carolinensis ENSACAG00000006199 I 0.850
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.845
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.838
igf2bp1 Danio rerio ENSDARG00000061478 I 0.837
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.835
IGF2BP3 Tetraodon nigroviridis ENSTNIG00000017755 I 0.835
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.832
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.832
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.832
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.832
IGF2BP3 Takifugu rubripes ENSTRUG00000006094 I 0.832
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.832
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.832
IGF2BP1 Homo sapiens ENSG00000159217 D 0.832
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.830
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.830
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.830
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.830
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.827
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.827
IGF2BP1 Oryctolagus cuniculus ENSOCUG00000004411 I 0.824
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.817
IGF2BP1 Gorilla gorilla ENSGGOG00000008872 I 0.814
IGF2BP1 Tursiops truncatus ENSTTRG00000007197 I 0.812
igf2bp2a Danio rerio ENSDARG00000003421 I 0.810
IGF2BP3 Choloepus hoffmanni ENSCHOG00000002341 I 0.807
ENSPPYG00000017730 Pongo pygmaeus ENSPPYG00000017730 I 0.804
IGF2BP1 Otolemur garnettii ENSOGAG00000001270 I 0.786
IGF2BP2 Gasterosteus aculeatus ENSGACG00000005991 I 0.784
IGF2BP1 Cavia porcellus ENSCPOG00000020174 I 0.784
IGF2BP2 Macaca mulatta ENSMMUG00000023416 I 0.779
IGF2BP2 Homo sapiens ENSG00000073792 D 0.779
IGF2BP2 Oryctolagus cuniculus ENSOCUG00000005057 I 0.779
XR_025001.1 Pan troglodytes ENSPTRG00000015705 I 0.779
Igf2bp2 Rattus norvegicus ENSRNOG00000025946 I 0.779
Igf2bp2 Mus musculus ENSMUSG00000033581 I 0.777
LOC424865 Gallus gallus ENSGALG00000006523 I 0.774
IGF2BP2 Oryzias latipes ENSORLG00000016532 I 0.751
IGF2BP2 Takifugu rubripes ENSTRUG00000009908 I 0.751
IGF2BP2 Tetraodon nigroviridis ENSTNIG00000016472 I 0.739
Igf2bp1 Dipodomys ordii ENSDORG00000014371 I 0.739
IGF2BP1 Pteropus vampyrus ENSPVAG00000001718 I 0.730
ENSGGOG00000024907 Gorilla gorilla ENSGGOG00000024907 I 0.716
IGF2BP2 Pteropus vampyrus ENSPVAG00000011494 I 0.711