IGF2BP2 (Tetraodon nigroviridis)
KH,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1)
PF00076 (RRM_1) 		IPR018111
IPR000504 		ENSTNIG00000016472 T22274_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
IGF2BP2
M294_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
356_20371350 		0.800
IGF2BP2
M032_0.6 		Homo sapiens VMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00033 		0.800
IGF2BP1
M296_0.6 		Homo sapiens AAGCACCCGUU SELEX
Cook et al.(2011)
359_12507992 		0.716
IGF2BP1
M293_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
355_20371350 		0.716
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000000088 RRM 4 70
ENSTNIP00000000088 RRM 86 152
ENSTNIP00000000088 KH 201 263
ENSTNIP00000000088 KH 281 346
ENSTNIP00000000088 KH 414 477
ENSTNIP00000000088 KH 496 560
ENSTNIP00000019571 RRM 5 71
ENSTNIP00000019571 RRM 87 153
ENSTNIP00000019571 KH 202 264
ENSTNIP00000019571 KH 282 347
ENSTNIP00000019571 KH 438 501
ENSTNIP00000019571 KH 520 584

Links

Other KH,RRM family RBPs
Other Tetraodon nigroviridis RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
IGF2BP2 Takifugu rubripes ENSTRUG00000009908 I 0.949
IGF2BP2 Gasterosteus aculeatus ENSGACG00000005991 I 0.866
igf2bp2a Danio rerio ENSDARG00000003421 I 0.843
IGF2BP2 Oryzias latipes ENSORLG00000016532 I 0.828
IGF2BP2 Oryctolagus cuniculus ENSOCUG00000005057 I 0.803
IGF2BP2 Macaca mulatta ENSMMUG00000023416 I 0.803
Igf2bp2 Rattus norvegicus ENSRNOG00000025946 I 0.803
Igf2bp2 Mus musculus ENSMUSG00000033581 I 0.803
XR_025001.1 Pan troglodytes ENSPTRG00000015705 I 0.800
IGF2BP2 Homo sapiens ENSG00000073792 D 0.800
LOC424865 Gallus gallus ENSGALG00000006523 I 0.785
AAI70479 Xenopus laevis AAI70479 I 0.749
O73932 Xenopus laevis O73932 I 0.749
AAI70477 Xenopus laevis AAI70477 I 0.749
AAC41285 Xenopus laevis AAC41285 I 0.749
AAC18598 Xenopus laevis AAC18598 I 0.749
AAI70196 Xenopus laevis AAI70196 I 0.749
AAI70224 Xenopus laevis AAI70224 I 0.749
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.747
ENSGGOG00000024907 Gorilla gorilla ENSGGOG00000024907 I 0.746
AAB97457 Xenopus laevis AAB97457 I 0.739
AAC18597 Xenopus laevis AAC18597 I 0.739
O57526 Xenopus laevis O57526 I 0.739
IGF2BP2 Pteropus vampyrus ENSPVAG00000011494 I 0.739
AAH57700 Xenopus laevis AAH57700 I 0.739
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.737
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.737
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.737
igf2bp1 Danio rerio ENSDARG00000061478 I 0.732
IGF2BP1 Anolis carolinensis ENSACAG00000006199 I 0.724
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.722
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.720
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.719
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.719
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.719
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.718
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.716
IGF2BP1 Homo sapiens ENSG00000159217 D 0.716
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.716
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.716
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.716
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.716
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.716
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.715
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.714
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.714
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.714
IGF2BP1 Oryctolagus cuniculus ENSOCUG00000004411 I 0.714
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.714
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.711
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.706
IGF2BP3 Tetraodon nigroviridis ENSTNIG00000017755 I 0.704
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.701
IGF2BP3 Oryzias latipes ENSORLG00000004712 I 0.701