igf2bp2a (Danio rerio)
KH,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1)
PF00076 (RRM_1) 		IPR018111
IPR000504 		ENSDARG00000003421 T22191_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
IGF2BP2
M294_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
356_20371350 		0.860
IGF2BP2
M032_0.6 		Homo sapiens VMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00033 		0.860
IGF2BP1
M296_0.6 		Homo sapiens AAGCACCCGUU SELEX
Cook et al.(2011)
359_12507992 		0.774
IGF2BP1
M293_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
355_20371350 		0.774
IGF2BP3
M295_0.6 		Homo sapiens Sequence logo not available CAUU PAR-clip
Cook et al.(2011)
357_20371350 		0.751
IGF2BP3
M163_0.6 		Homo sapiens AMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00172 		0.751
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000093196 RRM 4 69
ENSDARP00000093196 RRM 83 150
ENSDARP00000093196 KH 199 262
ENSDARP00000093196 KH 280 345
ENSDARP00000093196 KH 436 499
ENSDARP00000093196 KH 518 582

Links

Other KH,RRM family RBPs
Other Danio rerio RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
IGF2BP2 Gasterosteus aculeatus ENSGACG00000005991 I 0.908
IGF2BP2 Takifugu rubripes ENSTRUG00000009908 I 0.873
IGF2BP2 Oryzias latipes ENSORLG00000016532 I 0.870
IGF2BP2 Macaca mulatta ENSMMUG00000023416 I 0.863
Igf2bp2 Rattus norvegicus ENSRNOG00000025946 I 0.863
IGF2BP2 Oryctolagus cuniculus ENSOCUG00000005057 I 0.860
XR_025001.1 Pan troglodytes ENSPTRG00000015705 I 0.860
IGF2BP2 Homo sapiens ENSG00000073792 D 0.860
Igf2bp2 Mus musculus ENSMUSG00000033581 I 0.858
IGF2BP2 Tetraodon nigroviridis ENSTNIG00000016472 I 0.843
LOC424865 Gallus gallus ENSGALG00000006523 I 0.842
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.817
AAI70224 Xenopus laevis AAI70224 I 0.815
AAI70479 Xenopus laevis AAI70479 I 0.815
AAC41285 Xenopus laevis AAC41285 I 0.815
AAC18598 Xenopus laevis AAC18598 I 0.815
O73932 Xenopus laevis O73932 I 0.815
AAI70196 Xenopus laevis AAI70196 I 0.815
AAI70477 Xenopus laevis AAI70477 I 0.815
AAC18597 Xenopus laevis AAC18597 I 0.810
AAB97457 Xenopus laevis AAB97457 I 0.810
O57526 Xenopus laevis O57526 I 0.810
AAH57700 Xenopus laevis AAH57700 I 0.810
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.802
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.802
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.802
ENSGGOG00000024907 Gorilla gorilla ENSGGOG00000024907 I 0.802
IGF2BP2 Pteropus vampyrus ENSPVAG00000011494 I 0.794
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.788
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.780
IGF2BP1 Anolis carolinensis ENSACAG00000006199 I 0.777
IGF2BP1 Homo sapiens ENSG00000159217 D 0.774
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.774
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.774
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.774
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.774
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.774
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.774
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.772
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.772
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.772
IGF2BP1 Oryctolagus cuniculus ENSOCUG00000004411 I 0.772
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.772
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.772
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.772
igf2bp1 Danio rerio ENSDARG00000061478 I 0.769
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.769
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.769
IGF2BP3 Oryzias latipes ENSORLG00000004712 I 0.764
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.761
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.759
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.759
IGF2BP1 Gorilla gorilla ENSGGOG00000008872 I 0.756
IGF2BP1 Tursiops truncatus ENSTTRG00000007197 I 0.754
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.754
IGF2BP3 Homo sapiens ENSG00000136231 D 0.751
XR_022832.1 Pan troglodytes ENSPTRG00000018986 I 0.751
IGF2BP3 Callithrix jacchus ENSCJAG00000001499 I 0.751
IGF2BP3 Macaca mulatta ENSMMUG00000004839 I 0.751
IGF2BP1 Otolemur garnettii ENSOGAG00000001270 I 0.749
IGF2BP3 Tetraodon nigroviridis ENSTNIG00000017755 I 0.749
igf2bp3 Danio rerio ENSDARG00000010266 I 0.748
Igf2bp3 Mus musculus ENSMUSG00000029814 I 0.746
D3ZB84_RAT Rattus norvegicus ENSRNOG00000009052 I 0.746
IGF2BP3 Takifugu rubripes ENSTRUG00000006094 I 0.744
IGF2BP1 Cavia porcellus ENSCPOG00000020174 I 0.736
IGF2BP3 Microcebus murinus ENSMICG00000013683 I 0.732