AAC41285 (Xenopus laevis)
KH,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1)
PF00076 (RRM_1) 		IPR018111
IPR000504 		AAC41285 T22333_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
IGF2BP3
M295_0.6 		Homo sapiens Sequence logo not available CAUU PAR-clip
Cook et al.(2011)
357_20371350 		0.875
IGF2BP3
M163_0.6 		Homo sapiens AMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00172 		0.875
IGF2BP1
M296_0.6 		Homo sapiens AAGCACCCGUU SELEX
Cook et al.(2011)
359_12507992 		0.837
IGF2BP1
M293_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
355_20371350 		0.837
IGF2BP2
M294_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
356_20371350 		0.779
IGF2BP2
M032_0.6 		Homo sapiens VMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00033 		0.779
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAC41285 RRM 4 69
AAC41285 RRM 83 150
AAC41285 KH 207 270
AAC41285 KH 288 353
AAC41285 KH 420 483
AAC41285 KH 502 566

Links

Other KH,RRM family RBPs
Other Xenopus laevis RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAC18598 Xenopus laevis AAC18598 I 1.000
O73932 Xenopus laevis O73932 I 1.000
AAI70477 Xenopus laevis AAI70477 I 1.000
AAI70479 Xenopus laevis AAI70479 I 1.000
AAI70224 Xenopus laevis AAI70224 I 1.000
AAI70196 Xenopus laevis AAI70196 I 1.000
AAC18597 Xenopus laevis AAC18597 I 0.985
AAB97457 Xenopus laevis AAB97457 I 0.985
AAH57700 Xenopus laevis AAH57700 I 0.985
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.985
O57526 Xenopus laevis O57526 I 0.985
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.944
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.944
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.944
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.919
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.884
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.883
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.878
IGF2BP3 Callithrix jacchus ENSCJAG00000001499 I 0.875
IGF2BP3 Homo sapiens ENSG00000136231 D 0.875
XR_022832.1 Pan troglodytes ENSPTRG00000018986 I 0.875
IGF2BP3 Macaca mulatta ENSMMUG00000004839 I 0.873
Igf2bp3 Mus musculus ENSMUSG00000029814 I 0.865
D3ZB84_RAT Rattus norvegicus ENSRNOG00000009052 I 0.865
igf2bp3 Danio rerio ENSDARG00000010266 I 0.857
IGF2BP3 Microcebus murinus ENSMICG00000013683 I 0.856
IGF2BP3 Oryzias latipes ENSORLG00000004712 I 0.855
IGF2BP1 Anolis carolinensis ENSACAG00000006199 I 0.850
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.845
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.840
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.838
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.837
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.837
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.837
igf2bp1 Danio rerio ENSDARG00000061478 I 0.837
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.837
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.837
IGF2BP1 Homo sapiens ENSG00000159217 D 0.837
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.837
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.835
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.835
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.835
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.835
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.832
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.832
IGF2BP1 Oryctolagus cuniculus ENSOCUG00000004411 I 0.830
IGF2BP3 Tetraodon nigroviridis ENSTNIG00000017755 I 0.824
IGF2BP3 Takifugu rubripes ENSTRUG00000006094 I 0.822
IGF2BP1 Gorilla gorilla ENSGGOG00000008872 I 0.819
IGF2BP1 Tursiops truncatus ENSTTRG00000007197 I 0.817
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.817
igf2bp2a Danio rerio ENSDARG00000003421 I 0.815
IGF2BP3 Choloepus hoffmanni ENSCHOG00000002341 I 0.799
ENSPPYG00000017730 Pongo pygmaeus ENSPPYG00000017730 I 0.796
IGF2BP1 Otolemur garnettii ENSOGAG00000001270 I 0.791
IGF2BP2 Gasterosteus aculeatus ENSGACG00000005991 I 0.789
IGF2BP1 Cavia porcellus ENSCPOG00000020174 I 0.789
IGF2BP2 Homo sapiens ENSG00000073792 D 0.779
Igf2bp2 Rattus norvegicus ENSRNOG00000025946 I 0.779
IGF2BP2 Macaca mulatta ENSMMUG00000023416 I 0.779
IGF2BP2 Oryctolagus cuniculus ENSOCUG00000005057 I 0.779
XR_025001.1 Pan troglodytes ENSPTRG00000015705 I 0.779
Igf2bp2 Mus musculus ENSMUSG00000033581 I 0.777
LOC424865 Gallus gallus ENSGALG00000006523 I 0.774
IGF2BP2 Oryzias latipes ENSORLG00000016532 I 0.759
IGF2BP2 Takifugu rubripes ENSTRUG00000009908 I 0.756
IGF2BP2 Tetraodon nigroviridis ENSTNIG00000016472 I 0.749
Igf2bp1 Dipodomys ordii ENSDORG00000014371 I 0.744
IGF2BP1 Pteropus vampyrus ENSPVAG00000001718 I 0.733
ENSGGOG00000024907 Gorilla gorilla ENSGGOG00000024907 I 0.721
IGF2BP2 Pteropus vampyrus ENSPVAG00000011494 I 0.711