SS1G_01772 (Sclerotinia sclerotiorum)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		SS1G_01772 T25454_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_01772 RRM 256 326
SS1T_01772 RanBP ZF 353 382
SS1T_01772 RanBP ZF 439 470

Links

Other RanBP ZF,RRM family RBPs
Other Sclerotinia sclerotiorum RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_02626 Botrytis cinerea BC1G_02626 N 0.992
GSTUMT00003821001 Tuber melanosporum GSTUMT00003821001 N 0.955
VDAG_01381 Verticillium dahliae VDAG_01381 N 0.947
GLRG_04960 Colletotrichum graminicola GLRG_04960 N 0.947
estExt_fgenesh1_pm.C_10481 Trichoderma reesei estExt_fgenesh1_pm.C_10481 N 0.940
e_gw1.4.1358.1 Trichoderma virens e_gw1.4.1358.1 N 0.940
NFIA_039950 Neosartorya fischeri CADNFIAG00002962 N 0.940
estExt_fgenesh2_pm.C_20549 Thielavia terrestris estExt_fgenesh2_pm.C_20549 N 0.940
fgenesh1_pm.00866_#_655 Aspergillus carbonarius fgenesh1_pm.00866_#_655 N 0.940
Pc21g14870 Penicillium chrysogenum Pc21g14870 N 0.940
ATEG_09171 Aspergillus terreus CADATEAG00003372 N 0.940
FOXG_02027 Fusarium oxysporum FOXG_02027 N 0.940
estExt_Genewise1.C_sca_6_chr9_2_00515 Nectria haematococca estExt_Genewise1.C_sca_6_chr9_2_00515 N 0.940
AFLA_003900 Aspergillus flavus CADAFLAG00010456 N 0.940
AFUA_5G02160 Aspergillus fumigatus CADAFUAG00002676 N 0.940
ACLA_003080 Aspergillus clavatus CADACLAG00000382 N 0.940
An02g10780 Aspergillus niger CADANGAG00002596 N 0.940
AO090102000274 Aspergillus oryzae CADAORAG00009617 N 0.940
AB01016.1 Alternaria brassicicola AB01016.1 N 0.932
CHGG_07745 Chaetomium globosum CHGG_07745 N 0.932
PMAA_081320 Penicillium marneffei PMAA_081320 N 0.932
EAT77189.2 Phaeosphaeria nodorum EAT77189.2 N 0.932
estExt_Genewise1.C_70493 Cochliobolus heterostrophus C5 estExt_Genewise1.C_70493 N 0.932
ANIA_08055 Aspergillus nidulans CADANIAG00004081 N 0.932
NCU06684 Neurospora crassa NCU06684 N 0.932
estExt_fgenesh1_pg.C_10521 Neurospora tetrasperma estExt_fgenesh1_pg.C_10521 N 0.932
SNOG_15524 Stagonospora nodorum SNOG_15524 N 0.932
estExt_Genewise1.C_11720 Neurospora discreta estExt_Genewise1.C_11720 N 0.932
PTRG_11004 Pyrenophora tritici repentis PTRG_11004 N 0.925
estExt_fgenesh1_pm.C_30636 Myceliophthora thermophila estExt_fgenesh1_pm.C_30636 N 0.925
MGG_07327 Magnaporthe oryzae MGG_07327 N 0.925
estExt_Genewise1Plus.C_130308 Cryphonectria parasitica estExt_Genewise1Plus.C_130308 N 0.917
CIMG_06432 Coccidioides immitis CIMG_06432 N 0.910
CPSG_00638 Coccidioides posadasii CPSG_00638 N 0.910
BDBG_01534 Blastomyces dermatitidis BDBG_01534 N 0.910
Pa_2_11350 Podospora anserina Pa_2_11350 N 0.910
UREG_03978 Uncinocarpus reesii UREG_03978 N 0.910
TEQG_06114 Trichophyton equinum TEQG_06114 N 0.902
MCYG_02047 Microsporum canis MCYG_02047 N 0.902
MGYG_04027 Microsporum gypseum MGYG_04027 N 0.902
PABG_00314 Paracoccidioides brasiliensis PABG_00314 N 0.902
TRV_00689 Trichophyton verrucosum TRV_00689 N 0.902
TERG_04360 Trichophyton rubrum TERG_04360 N 0.902
ARB_00799 Arthroderma benhamiae ARB_00799 N 0.902
TESG_06793 Trichophyton tonsurans TESG_06793 N 0.902
estExt_fgenesh1_pm.C_chr_80348 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_80348 N 0.895
estExt_Genewise1.C_50445 Mycosphaerella fijiensis estExt_Genewise1.C_50445 N 0.887
FVEG_05191 Fusarium verticillioides FVEG_05191 N 0.797
YALI0F21835g Yarrowia lipolytica YALI0F21835g N 0.744