CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TAF15
(
Echinops telfairi
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
ENSETEG00000001337
T25554_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000001080
RRM
219
297
IFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFHGNIIK
ENSETEP00000001080
RanBP ZF
337
358
KSGDWVCLTPSCGNMNFARRNS
Links
Other
RanBP ZF,RRM
family RBPs
Other
Echinops telfairi
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCJAG00000002118
Callithrix jacchus
ENSCJAG00000002118
I
0.913
ENSPPYG00000008194
Pongo pygmaeus
ENSPPYG00000008194
I
0.908
TAF15
Procavia capensis
ENSPCAG00000009582
I
0.892
TAF15
Bos taurus
ENSBTAG00000006916
I
0.892
TAF15
Pan troglodytes
ENSPTRG00000009026
I
0.892
TAF15
Pteropus vampyrus
ENSPVAG00000003952
I
0.892
Ame_R012008
Ailuropoda melanoleuca
Ame_R012008
I
0.892
TAF15
Sus scrofa
ENSSSCG00000017707
I
0.892
TAF15
Sorex araneus
ENSSARG00000012092
I
0.892
TAF15
Homo sapiens
ENSG00000172660
I
0.892
TAF15
Oryctolagus cuniculus
ENSOCUG00000002838
I
0.892
TAF15
Canis familiaris
ENSCAFG00000018176
I
0.892
TAF15
Loxodonta africana
ENSLAFG00000018332
I
0.892
TAF15
Gorilla gorilla
ENSGGOG00000005693
I
0.892
LOC100071562
Equus caballus
ENSECAG00000000718
I
0.892
LOC100391580
Callithrix jacchus
ENSCJAG00000014961
I
0.892
ENSCJAG00000002807
Callithrix jacchus
ENSCJAG00000002807
I
0.892
TAF15
Macaca mulatta
ENSMMUG00000003305
I
0.892
TAF15
Myotis lucifugus
ENSMLUG00000002870
I
0.892
TAF15
Tursiops truncatus
ENSTTRG00000014145
I
0.892
Taf15
Mus musculus
ENSMUSG00000020680
I
0.883
Taf15
Rattus norvegicus
ENSRNOG00000010604
I
0.883
ENSRNOG00000024836
Rattus norvegicus
ENSRNOG00000024836
I
0.864
TAF15
Dasypus novemcinctus
ENSDNOG00000006956
I
0.856
TAF15
Cavia porcellus
ENSCPOG00000010259
I
0.856
TAF15
Taeniopygia guttata
ENSTGUG00000004702
I
0.829
TAF15
Meleagris gallopavo
ENSMGAG00000003842
I
0.829
TAF15
Gallus gallus
ENSGALG00000002060
I
0.829
TAF15
Macropus eugenii
ENSMEUG00000006009
I
0.820
TAF15
Ornithorhynchus anatinus
ENSOANG00000014273
I
0.820
TAF15
Monodelphis domestica
ENSMODG00000019123
I
0.811
TAF15
Otolemur garnettii
ENSOGAG00000011719
N
0.793
FUS
Choloepus hoffmanni
ENSCHOG00000010780
I
0.757
AAH77935
Xenopus laevis
AAH77935
I
0.730
AAH81071
Xenopus laevis
AAH81071
I
0.730
FUS
Tarsius syrichta
ENSTSYG00000011757
I
0.704
fus
Xenopus tropicalis
ENSXETG00000001951
I
0.703
TAF15
Danio rerio
ENSDARG00000070019
I
0.703