ENSRNOG00000024836 (Rattus norvegicus)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSRNOG00000024836 T25651_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FUS
M316_0.6 		Homo sapiens GGUG SELEX
Cook et al.(2011)
637_11098054 		0.730
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000022171 RRM 203 281
ENSRNOP00000022171 RanBP ZF 321 351

Links

Other RanBP ZF,RRM family RBPs
Other Rattus norvegicus RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Taf15 Rattus norvegicus ENSRNOG00000010604 I 0.937
Taf15 Mus musculus ENSMUSG00000020680 I 0.937
LOC100391580 Callithrix jacchus ENSCJAG00000014961 I 0.928
ENSCJAG00000002807 Callithrix jacchus ENSCJAG00000002807 I 0.928
TAF15 Canis familiaris ENSCAFG00000018176 I 0.928
TAF15 Bos taurus ENSBTAG00000006916 I 0.928
LOC100071562 Equus caballus ENSECAG00000000718 I 0.928
TAF15 Homo sapiens ENSG00000172660 I 0.928
TAF15 Myotis lucifugus ENSMLUG00000002870 I 0.928
TAF15 Loxodonta africana ENSLAFG00000018332 I 0.928
TAF15 Gorilla gorilla ENSGGOG00000005693 I 0.928
TAF15 Procavia capensis ENSPCAG00000009582 I 0.928
TAF15 Macaca mulatta ENSMMUG00000003305 I 0.928
TAF15 Oryctolagus cuniculus ENSOCUG00000002838 I 0.928
TAF15 Pan troglodytes ENSPTRG00000009026 I 0.928
Ame_R012008 Ailuropoda melanoleuca Ame_R012008 I 0.928
TAF15 Tursiops truncatus ENSTTRG00000014145 I 0.928
TAF15 Pteropus vampyrus ENSPVAG00000003952 I 0.928
TAF15 Sorex araneus ENSSARG00000012092 I 0.928
TAF15 Sus scrofa ENSSSCG00000017707 I 0.928
ENSPPYG00000008194 Pongo pygmaeus ENSPPYG00000008194 I 0.927
TAF15 Cavia porcellus ENSCPOG00000010259 I 0.910
TAF15 Dasypus novemcinctus ENSDNOG00000006956 I 0.883
TAF15 Gallus gallus ENSGALG00000002060 I 0.874
TAF15 Meleagris gallopavo ENSMGAG00000003842 I 0.874
TAF15 Taeniopygia guttata ENSTGUG00000004702 I 0.874
TAF15 Ornithorhynchus anatinus ENSOANG00000014273 I 0.874
TAF15 Echinops telfairi ENSETEG00000001337 N 0.864
TAF15 Macropus eugenii ENSMEUG00000006009 I 0.856
ENSCJAG00000002118 Callithrix jacchus ENSCJAG00000002118 I 0.855
TAF15 Monodelphis domestica ENSMODG00000019123 I 0.847
TAF15 Otolemur garnettii ENSOGAG00000011719 N 0.829
AAH77935 Xenopus laevis AAH77935 I 0.784
AAH81071 Xenopus laevis AAH81071 I 0.784
TAF15 Danio rerio ENSDARG00000070019 I 0.748
fus Xenopus tropicalis ENSXETG00000001951 I 0.739
TAF15 Oryzias latipes ENSORLG00000011382 I 0.730
Fus Mus musculus ENSMUSG00000030795 I 0.730
FUS Monodelphis domestica ENSMODG00000001889 I 0.730
FUS Pan troglodytes ENSPTRG00000008038 I 0.730
FUS Ornithorhynchus anatinus ENSOANG00000005606 I 0.730
FUS Oryctolagus cuniculus ENSOCUG00000021526 I 0.730
FUS Pteropus vampyrus ENSPVAG00000003097 I 0.730
FUS Erinaceus europaeus ENSEEUG00000004934 I 0.730
FUS Canis familiaris ENSCAFG00000016862 I 0.730
FUS Macaca mulatta ENSMMUG00000019637 I 0.730
FUS Anolis carolinensis ENSACAG00000006776 I 0.730
FUS Sus scrofa ENSSSCG00000007759 I 0.730
LOC100395517 Callithrix jacchus ENSCJAG00000003169 I 0.730
FUS_BOVIN Bos taurus ENSBTAG00000005757 I 0.730
FUS Gorilla gorilla ENSGGOG00000003707 I 0.730
FUS Homo sapiens ENSG00000089280 D 0.730
TAF15 Tetraodon nigroviridis ENSTNIG00000004057 I 0.721
FUS Macropus eugenii ENSMEUG00000000968 I 0.721
Fus Rattus norvegicus ENSRNOG00000023360 I 0.721
TAF15 Takifugu rubripes ENSTRUG00000007798 I 0.721
AAH44319 Xenopus laevis AAH44319 I 0.721
AAH74437 Xenopus laevis AAH74437 I 0.721
FUS Tarsius syrichta ENSTSYG00000011757 I 0.718
FUS Choloepus hoffmanni ENSCHOG00000010780 I 0.718
FUS Tetraodon nigroviridis ENSTNIG00000011303 I 0.712
D3ZSJ6_RAT Rattus norvegicus ENSRNOG00000028611 I 0.703