Taf15 (Rattus norvegicus)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSRNOG00000010604 T25648_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FUS
M316_0.6 		Homo sapiens GGUG SELEX
Cook et al.(2011)
637_11098054 		0.766
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000014438 RRM 234 312
ENSRNOP00000014438 RanBP ZF 352 383
ENSRNOP00000043425 RRM 234 312
ENSRNOP00000043425 RanBP ZF 352 383
ENSRNOP00000059715 RRM 176 254
ENSRNOP00000059715 RanBP ZF 294 325
ENSRNOP00000063100 RRM 234 312
ENSRNOP00000063100 RanBP ZF 352 383

Links

Other RanBP ZF,RRM family RBPs
Other Rattus norvegicus RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Taf15 Mus musculus ENSMUSG00000020680 I 1.000
Ame_R012008 Ailuropoda melanoleuca Ame_R012008 I 0.991
TAF15 Gorilla gorilla ENSGGOG00000005693 I 0.991
TAF15 Tursiops truncatus ENSTTRG00000014145 I 0.991
TAF15 Homo sapiens ENSG00000172660 I 0.991
LOC100071562 Equus caballus ENSECAG00000000718 I 0.991
TAF15 Bos taurus ENSBTAG00000006916 I 0.991
ENSCJAG00000002807 Callithrix jacchus ENSCJAG00000002807 I 0.991
LOC100391580 Callithrix jacchus ENSCJAG00000014961 I 0.991
TAF15 Loxodonta africana ENSLAFG00000018332 I 0.991
TAF15 Myotis lucifugus ENSMLUG00000002870 I 0.991
TAF15 Sorex araneus ENSSARG00000012092 I 0.991
TAF15 Pan troglodytes ENSPTRG00000009026 I 0.991
TAF15 Pteropus vampyrus ENSPVAG00000003952 I 0.991
TAF15 Canis familiaris ENSCAFG00000018176 I 0.991
TAF15 Procavia capensis ENSPCAG00000009582 I 0.991
TAF15 Sus scrofa ENSSSCG00000017707 I 0.991
TAF15 Macaca mulatta ENSMMUG00000003305 I 0.991
TAF15 Oryctolagus cuniculus ENSOCUG00000002838 I 0.991
ENSPPYG00000008194 Pongo pygmaeus ENSPPYG00000008194 I 0.973
TAF15 Cavia porcellus ENSCPOG00000010259 I 0.973
TAF15 Dasypus novemcinctus ENSDNOG00000006956 I 0.946
TAF15 Meleagris gallopavo ENSMGAG00000003842 I 0.937
TAF15 Ornithorhynchus anatinus ENSOANG00000014273 I 0.937
TAF15 Taeniopygia guttata ENSTGUG00000004702 I 0.937
ENSRNOG00000024836 Rattus norvegicus ENSRNOG00000024836 I 0.937
TAF15 Gallus gallus ENSGALG00000002060 I 0.937
TAF15 Macropus eugenii ENSMEUG00000006009 I 0.919
TAF15 Monodelphis domestica ENSMODG00000019123 I 0.910
ENSCJAG00000002118 Callithrix jacchus ENSCJAG00000002118 I 0.892
TAF15 Otolemur garnettii ENSOGAG00000011719 N 0.892
TAF15 Echinops telfairi ENSETEG00000001337 N 0.883
AAH77935 Xenopus laevis AAH77935 I 0.838
AAH81071 Xenopus laevis AAH81071 I 0.829
fus Xenopus tropicalis ENSXETG00000001951 I 0.784
TAF15 Danio rerio ENSDARG00000070019 I 0.775
FUS Monodelphis domestica ENSMODG00000001889 I 0.766
FUS Sus scrofa ENSSSCG00000007759 I 0.766
FUS Macaca mulatta ENSMMUG00000019637 I 0.766
FUS Anolis carolinensis ENSACAG00000006776 I 0.766
FUS Pteropus vampyrus ENSPVAG00000003097 I 0.766
FUS Ornithorhynchus anatinus ENSOANG00000005606 I 0.766
Fus Mus musculus ENSMUSG00000030795 I 0.766
FUS Homo sapiens ENSG00000089280 D 0.766
AAH74437 Xenopus laevis AAH74437 I 0.766
FUS Oryctolagus cuniculus ENSOCUG00000021526 I 0.766
FUS_BOVIN Bos taurus ENSBTAG00000005757 I 0.766
AAH44319 Xenopus laevis AAH44319 I 0.766
FUS Gorilla gorilla ENSGGOG00000003707 I 0.766
LOC100395517 Callithrix jacchus ENSCJAG00000003169 I 0.766
FUS Erinaceus europaeus ENSEEUG00000004934 I 0.766
FUS Canis familiaris ENSCAFG00000016862 I 0.766
FUS Pan troglodytes ENSPTRG00000008038 I 0.766
Fus Rattus norvegicus ENSRNOG00000023360 I 0.757
TAF15 Oryzias latipes ENSORLG00000011382 I 0.757
FUS Macropus eugenii ENSMEUG00000000968 I 0.757
TAF15 Tetraodon nigroviridis ENSTNIG00000004057 I 0.757
TAF15 Takifugu rubripes ENSTRUG00000007798 I 0.757
TAF15 Choloepus hoffmanni ENSCHOG00000002729 N 0.739
FUS Tarsius syrichta ENSTSYG00000011757 I 0.739
D3ZSJ6_RAT Rattus norvegicus ENSRNOG00000028611 I 0.739
FUS Tetraodon nigroviridis ENSTNIG00000011303 I 0.730
FUS Choloepus hoffmanni ENSCHOG00000010780 I 0.730
FUS Gasterosteus aculeatus ENSGACG00000014903 I 0.712