CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
TAF15
(
Taeniopygia guttata
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
ENSTGUG00000004702
T25664_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
FUS
M316_0.6
Homo sapiens
GGUG
SELEX
Cook et al.(2011)
637_11098054
0.793
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000004873
RRM
235
313
IFVQGLGEDVSTDQVADYFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFNGNVIK
ENSTGUP00000004873
RanBP ZF
353
384
KNGDWVCPNPSCGNMNFARRNSCNQCGEPRPE
Links
Other
RanBP ZF,RRM
family RBPs
Other
Taeniopygia guttata
RBPs
66 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TAF15
Meleagris gallopavo
ENSMGAG00000003842
I
1.000
TAF15
Gallus gallus
ENSGALG00000002060
I
1.000
TAF15
Ornithorhynchus anatinus
ENSOANG00000014273
I
0.946
Taf15
Mus musculus
ENSMUSG00000020680
I
0.937
Taf15
Rattus norvegicus
ENSRNOG00000010604
I
0.937
TAF15
Canis familiaris
ENSCAFG00000018176
I
0.928
ENSCJAG00000002807
Callithrix jacchus
ENSCJAG00000002807
I
0.928
TAF15
Loxodonta africana
ENSLAFG00000018332
I
0.928
LOC100391580
Callithrix jacchus
ENSCJAG00000014961
I
0.928
TAF15
Sorex araneus
ENSSARG00000012092
I
0.928
TAF15
Gorilla gorilla
ENSGGOG00000005693
I
0.928
TAF15
Homo sapiens
ENSG00000172660
I
0.928
TAF15
Procavia capensis
ENSPCAG00000009582
I
0.928
TAF15
Oryctolagus cuniculus
ENSOCUG00000002838
I
0.928
LOC100071562
Equus caballus
ENSECAG00000000718
I
0.928
TAF15
Myotis lucifugus
ENSMLUG00000002870
I
0.928
TAF15
Sus scrofa
ENSSSCG00000017707
I
0.928
Ame_R012008
Ailuropoda melanoleuca
Ame_R012008
I
0.928
TAF15
Pan troglodytes
ENSPTRG00000009026
I
0.928
TAF15
Bos taurus
ENSBTAG00000006916
I
0.928
TAF15
Macaca mulatta
ENSMMUG00000003305
I
0.928
TAF15
Tursiops truncatus
ENSTTRG00000014145
I
0.928
TAF15
Pteropus vampyrus
ENSPVAG00000003952
I
0.928
ENSPPYG00000008194
Pongo pygmaeus
ENSPPYG00000008194
I
0.910
TAF15
Cavia porcellus
ENSCPOG00000010259
I
0.910
TAF15
Dasypus novemcinctus
ENSDNOG00000006956
I
0.883
TAF15
Macropus eugenii
ENSMEUG00000006009
I
0.874
ENSRNOG00000024836
Rattus norvegicus
ENSRNOG00000024836
I
0.874
TAF15
Monodelphis domestica
ENSMODG00000019123
I
0.865
TAF15
Otolemur garnettii
ENSOGAG00000011719
N
0.847
ENSCJAG00000002118
Callithrix jacchus
ENSCJAG00000002118
I
0.838
AAH81071
Xenopus laevis
AAH81071
I
0.838
AAH77935
Xenopus laevis
AAH77935
I
0.838
TAF15
Echinops telfairi
ENSETEG00000001337
N
0.829
TAF15
Danio rerio
ENSDARG00000070019
I
0.811
fus
Xenopus tropicalis
ENSXETG00000001951
I
0.811
FUS
Oryctolagus cuniculus
ENSOCUG00000021526
I
0.793
FUS
Pan troglodytes
ENSPTRG00000008038
I
0.793
FUS
Pteropus vampyrus
ENSPVAG00000003097
I
0.793
TAF15
Oryzias latipes
ENSORLG00000011382
I
0.793
FUS
Monodelphis domestica
ENSMODG00000001889
I
0.793
FUS
Ornithorhynchus anatinus
ENSOANG00000005606
I
0.793
Fus
Mus musculus
ENSMUSG00000030795
I
0.793
FUS
Homo sapiens
ENSG00000089280
D
0.793
FUS_BOVIN
Bos taurus
ENSBTAG00000005757
I
0.793
FUS
Canis familiaris
ENSCAFG00000016862
I
0.793
FUS
Anolis carolinensis
ENSACAG00000006776
I
0.793
AAH74437
Xenopus laevis
AAH74437
I
0.793
AAH44319
Xenopus laevis
AAH44319
I
0.793
FUS
Macaca mulatta
ENSMMUG00000019637
I
0.793
FUS
Sus scrofa
ENSSSCG00000007759
I
0.793
FUS
Erinaceus europaeus
ENSEEUG00000004934
I
0.793
FUS
Gorilla gorilla
ENSGGOG00000003707
I
0.793
LOC100395517
Callithrix jacchus
ENSCJAG00000003169
I
0.793
TAF15
Takifugu rubripes
ENSTRUG00000007798
I
0.784
Fus
Rattus norvegicus
ENSRNOG00000023360
I
0.784
FUS
Macropus eugenii
ENSMEUG00000000968
I
0.784
TAF15
Tetraodon nigroviridis
ENSTNIG00000004057
I
0.784
D3ZSJ6_RAT
Rattus norvegicus
ENSRNOG00000028611
I
0.766
FUS
Tarsius syrichta
ENSTSYG00000011757
I
0.766
FUS
Tetraodon nigroviridis
ENSTNIG00000011303
I
0.757
FUS
Choloepus hoffmanni
ENSCHOG00000010780
I
0.757
FUS
Gasterosteus aculeatus
ENSGACG00000014903
I
0.730
FUS
Loxodonta africana
ENSLAFG00000001643
I
0.712
TAF15
Choloepus hoffmanni
ENSCHOG00000002729
N
0.712
ENSETEG00000015358
Echinops telfairi
ENSETEG00000015358
I
0.703