CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TAF15
(
Otolemur garnettii
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
ENSOGAG00000011719
T25622_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000010489
RRM
233
303
IFVQGLGEGVSTDQVGEFFKQIGVIKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPSAKAAIDWFDXX
ENSOGAP00000010489
RanBP ZF
351
382
KSGDWVCPNPSCGNMNFARRNSCNQCNEPRPE
Links
Other
RanBP ZF,RRM
family RBPs
Other
Otolemur garnettii
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100071562
Equus caballus
ENSECAG00000000718
I
0.901
TAF15
Procavia capensis
ENSPCAG00000009582
I
0.901
ENSCJAG00000002807
Callithrix jacchus
ENSCJAG00000002807
I
0.901
TAF15
Canis familiaris
ENSCAFG00000018176
I
0.901
TAF15
Homo sapiens
ENSG00000172660
I
0.901
TAF15
Gorilla gorilla
ENSGGOG00000005693
I
0.901
TAF15
Oryctolagus cuniculus
ENSOCUG00000002838
I
0.901
TAF15
Macaca mulatta
ENSMMUG00000003305
I
0.901
TAF15
Myotis lucifugus
ENSMLUG00000002870
I
0.901
TAF15
Loxodonta africana
ENSLAFG00000018332
I
0.901
TAF15
Bos taurus
ENSBTAG00000006916
I
0.901
LOC100391580
Callithrix jacchus
ENSCJAG00000014961
I
0.901
TAF15
Tursiops truncatus
ENSTTRG00000014145
I
0.901
TAF15
Pan troglodytes
ENSPTRG00000009026
I
0.901
TAF15
Pteropus vampyrus
ENSPVAG00000003952
I
0.901
TAF15
Sus scrofa
ENSSSCG00000017707
I
0.901
TAF15
Sorex araneus
ENSSARG00000012092
I
0.901
Ame_R012008
Ailuropoda melanoleuca
Ame_R012008
I
0.901
Taf15
Mus musculus
ENSMUSG00000020680
I
0.892
Taf15
Rattus norvegicus
ENSRNOG00000010604
I
0.892
ENSPPYG00000008194
Pongo pygmaeus
ENSPPYG00000008194
I
0.883
TAF15
Cavia porcellus
ENSCPOG00000010259
I
0.874
TAF15
Dasypus novemcinctus
ENSDNOG00000006956
I
0.865
TAF15
Ornithorhynchus anatinus
ENSOANG00000014273
I
0.856
TAF15
Meleagris gallopavo
ENSMGAG00000003842
I
0.847
TAF15
Gallus gallus
ENSGALG00000002060
I
0.847
TAF15
Taeniopygia guttata
ENSTGUG00000004702
I
0.847
TAF15
Macropus eugenii
ENSMEUG00000006009
I
0.829
ENSRNOG00000024836
Rattus norvegicus
ENSRNOG00000024836
I
0.829
TAF15
Monodelphis domestica
ENSMODG00000019123
I
0.820
ENSCJAG00000002118
Callithrix jacchus
ENSCJAG00000002118
I
0.802
TAF15
Echinops telfairi
ENSETEG00000001337
N
0.793
AAH77935
Xenopus laevis
AAH77935
I
0.766
AAH81071
Xenopus laevis
AAH81071
I
0.748
fus
Xenopus tropicalis
ENSXETG00000001951
I
0.703
TAF15
Danio rerio
ENSDARG00000070019
I
0.703
Taf15
Dipodomys ordii
ENSDORG00000014619
N
0.702