AAH77935 (Xenopus laevis)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		AAH77935 T25917_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FUS
M316_0.6 		Homo sapiens GGUG SELEX
Cook et al.(2011)
637_11098054 		0.730
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH77935 RRM 275 353
AAH77935 RanBP ZF 403 434

Links

Other RanBP ZF,RRM family RBPs
Other Xenopus laevis RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH81071 Xenopus laevis AAH81071 I 0.910
TAF15 Gallus gallus ENSGALG00000002060 I 0.838
TAF15 Meleagris gallopavo ENSMGAG00000003842 I 0.838
TAF15 Taeniopygia guttata ENSTGUG00000004702 I 0.838
Taf15 Mus musculus ENSMUSG00000020680 I 0.838
Taf15 Rattus norvegicus ENSRNOG00000010604 I 0.838
TAF15 Pan troglodytes ENSPTRG00000009026 I 0.829
TAF15 Loxodonta africana ENSLAFG00000018332 I 0.829
TAF15 Gorilla gorilla ENSGGOG00000005693 I 0.829
TAF15 Tursiops truncatus ENSTTRG00000014145 I 0.829
TAF15 Bos taurus ENSBTAG00000006916 I 0.829
TAF15 Myotis lucifugus ENSMLUG00000002870 I 0.829
TAF15 Oryctolagus cuniculus ENSOCUG00000002838 I 0.829
Ame_R012008 Ailuropoda melanoleuca Ame_R012008 I 0.829
TAF15 Procavia capensis ENSPCAG00000009582 I 0.829
TAF15 Macaca mulatta ENSMMUG00000003305 I 0.829
TAF15 Homo sapiens ENSG00000172660 I 0.829
TAF15 Pteropus vampyrus ENSPVAG00000003952 I 0.829
LOC100391580 Callithrix jacchus ENSCJAG00000014961 I 0.829
TAF15 Canis familiaris ENSCAFG00000018176 I 0.829
ENSCJAG00000002807 Callithrix jacchus ENSCJAG00000002807 I 0.829
LOC100071562 Equus caballus ENSECAG00000000718 I 0.829
TAF15 Sus scrofa ENSSSCG00000017707 I 0.829
TAF15 Sorex araneus ENSSARG00000012092 I 0.829
TAF15 Ornithorhynchus anatinus ENSOANG00000014273 I 0.829
TAF15 Cavia porcellus ENSCPOG00000010259 I 0.820
ENSPPYG00000008194 Pongo pygmaeus ENSPPYG00000008194 I 0.811
TAF15 Dasypus novemcinctus ENSDNOG00000006956 I 0.793
ENSRNOG00000024836 Rattus norvegicus ENSRNOG00000024836 I 0.784
TAF15 Macropus eugenii ENSMEUG00000006009 I 0.766
TAF15 Otolemur garnettii ENSOGAG00000011719 N 0.766
taf15 Xenopus tropicalis ENSXETG00000013477 N 0.748
fus Xenopus tropicalis ENSXETG00000001951 I 0.748
TAF15 Monodelphis domestica ENSMODG00000019123 I 0.748
ENSCJAG00000002118 Callithrix jacchus ENSCJAG00000002118 I 0.739
FUS Sus scrofa ENSSSCG00000007759 I 0.730
FUS Erinaceus europaeus ENSEEUG00000004934 I 0.730
AAH74437 Xenopus laevis AAH74437 I 0.730
FUS Ornithorhynchus anatinus ENSOANG00000005606 I 0.730
AAH44319 Xenopus laevis AAH44319 I 0.730
FUS Canis familiaris ENSCAFG00000016862 I 0.730
FUS Anolis carolinensis ENSACAG00000006776 I 0.730
TAF15 Echinops telfairi ENSETEG00000001337 N 0.730
LOC100395517 Callithrix jacchus ENSCJAG00000003169 I 0.730
Fus Rattus norvegicus ENSRNOG00000023360 I 0.730
FUS Macaca mulatta ENSMMUG00000019637 I 0.730
FUS Monodelphis domestica ENSMODG00000001889 I 0.730
Fus Mus musculus ENSMUSG00000030795 I 0.730
FUS Oryctolagus cuniculus ENSOCUG00000021526 I 0.730
FUS Pan troglodytes ENSPTRG00000008038 I 0.730
FUS Macropus eugenii ENSMEUG00000000968 I 0.730
FUS Homo sapiens ENSG00000089280 D 0.730
FUS Gorilla gorilla ENSGGOG00000003707 I 0.730
FUS Pteropus vampyrus ENSPVAG00000003097 I 0.730
FUS_BOVIN Bos taurus ENSBTAG00000005757 I 0.730
D3ZSJ6_RAT Rattus norvegicus ENSRNOG00000028611 I 0.712
TAF15 Danio rerio ENSDARG00000070019 I 0.712
FUS Tetraodon nigroviridis ENSTNIG00000011303 I 0.712
FUS Tarsius syrichta ENSTSYG00000011757 I 0.712