An08g01040 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00006423 T33557_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00006300 RRM 69 138

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.986
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.986
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.986
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.986
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.986
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.971
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.971
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.971
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.957
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.957
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.957
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.943
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.943
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.943
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.929
MCYG_08495 Microsporum canis MCYG_08495 N 0.929
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.929
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.929
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.929
NCU03946 Neurospora crassa NCU03946 N 0.929
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.929
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.929
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.914
MGG_07252 Magnaporthe oryzae MGG_07252 N 0.914
BC1G_07056 Botrytis cinerea BC1G_07056 N 0.914
gw1.9.853.1 Trichoderma virens gw1.9.853.1 N 0.914
estExt_fgenesh1_pm.C_10632 Trichoderma atroviride estExt_fgenesh1_pm.C_10632 N 0.914
e_gw1.4.511.1 Trichoderma reesei e_gw1.4.511.1 N 0.914
TERG_02884 Trichophyton rubrum TERG_02884 N 0.914
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.914
SS1G_03706 Sclerotinia sclerotiorum SS1G_03706 N 0.914
FOXG_05189 Fusarium oxysporum FOXG_05189 N 0.900
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.900
FVEG_02944 Fusarium verticillioides FVEG_02944 N 0.900
SNOG_05129 Stagonospora nodorum SNOG_05129 N 0.886
EAT87520.1 Phaeosphaeria nodorum EAT87520.1 N 0.886
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.871
FGSG_10271 Fusarium graminearum FGSG_10271 N 0.871
PTRG_03828 Pyrenophora tritici repentis PTRG_03828 N 0.857
estExt_Genewise1.C_100240 Cochliobolus heterostrophus C5 estExt_Genewise1.C_100240 N 0.857
AB03725.1 Alternaria brassicicola AB03725.1 N 0.857
estExt_fgenesh1_kg.C_50066 Myceliophthora thermophila estExt_fgenesh1_kg.C_50066 N 0.845
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.845
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.831
CNBG_5499 Cryptococcus neoformans CNBG_5499 N 0.814
Pa_4_2600 Podospora anserina Pa_4_2600 N 0.803
UM02401 Ustilago maydis UM02401 N 0.800
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.800
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.786
estExt_Genewise1.C_11041 Mucor circinelloides estExt_Genewise1.C_11041 N 0.786
fgenesh1_pm.C_scaffold_6000038 Sporobolomyces roseus fgenesh1_pm.C_scaffold_6000038 N 0.786
PredSwiss_CON654.3 Pneumocystis carinii PredSwiss_CON654.3 I 0.771
EDP44971.1 Malassezia globosa EDP44971.1 N 0.771
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.757
estExt_fgenesh2_pm.C_40328 Serpula lacrymans estExt_fgenesh2_pm.C_40328 N 0.746
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.743
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.743
gw1.7.208.1 Melampsora laricis populina gw1.7.208.1 N 0.729
PTTG_05043 Puccinia triticina PTTG_05043 N 0.729
PGTG_01300 Puccinia graminis PGTG_01300 N 0.729
e_gw1.4.778.1 Heterobasidion annosum e_gw1.4.778.1 N 0.718
CC1G_14585 Coprinopsis cinerea CC1G_14585 N 0.714
Cucsa.093720 Cucumis sativus Cucsa.093720 N 0.714
gww1.2.642.1 Laccaria bicolor gww1.2.642.1 N 0.714
GP3.065690 Batrachochytrium dendrobatidis GP3.065690 N 0.714
ppa011157m Prunus persica ppa011157m N 0.714
cassava31160.valid.m1 Manihot esculenta cassava31160.valid.m1 N 0.700
Cucsa.398220 Cucumis sativus Cucsa.398220 N 0.700
Glyma05g31030.1 Glycine max Glyma05g31030.1 N 0.700
Glyma15g06030.1 Glycine max Glyma15g06030.1 N 0.700
Glyma08g14240.1 Glycine max Glyma08g14240.1 N 0.700
e_gw1.4.2157.1 Pleurotus ostreatus e_gw1.4.2157.1 N 0.700