estExt_Genewise1Plus.C_500038 (Mycosphaerella fijiensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_500038 T51471_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_500038 RRM 105 173
estExt_Genewise1Plus.C_500038 RRM 189 248

Links

Other RRM family RBPs
Other Mycosphaerella fijiensis RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.6.1353.1 Mycosphaerella graminicola gw1.6.1353.1 N 0.915
ACLA_068230 Aspergillus clavatus CADACLAG00007015 N 0.824
NFIA_082870 Neosartorya fischeri CADNFIAG00006872 N 0.817
AFUA_2G06090 Aspergillus fumigatus CADAFUAG00003703 N 0.809
ARB_05069 Arthroderma benhamiae ARB_05069 N 0.806
MCYG_04652 Microsporum canis MCYG_04652 N 0.806
TERG_03265 Trichophyton rubrum TERG_03265 N 0.806
PMAA_028640 Penicillium marneffei PMAA_028640 N 0.801
BDBG_05401 Blastomyces dermatitidis BDBG_05401 N 0.793
TEQG_02438 Trichophyton equinum TEQG_02438 N 0.791
HCAG_03640 Histoplasma capsulatum HCAG_03640 N 0.786
ANIA_10941 Aspergillus nidulans CADANIAG00000536 N 0.779
TRV_06675 Trichophyton verrucosum TRV_06675 N 0.776
UREG_00938 Uncinocarpus reesii UREG_00938 N 0.771
CPSG_02224 Coccidioides posadasii CPSG_02224 N 0.771
CIMG_00990 Coccidioides immitis CIMG_00990 N 0.771
GSTUMT00005496001 Tuber melanosporum GSTUMT00005496001 N 0.766
AO090001000725 Aspergillus oryzae CADAORAG00000662 N 0.764
AFLA_130230 Aspergillus flavus CADAFLAG00010081 N 0.764
ATEG_06805 Aspergillus terreus CADATEAG00006229 N 0.764
An02g14690 Aspergillus niger CADANGAG00002994 N 0.764
Pc22g08010 Penicillium chrysogenum Pc22g08010 N 0.757
AB01113.1 Alternaria brassicicola AB01113.1 N 0.755
estExt_Genewise1Plus.C_240153 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_240153 N 0.743
SS1G_05220 Sclerotinia sclerotiorum SS1G_05220 N 0.743
MGG_06881 Magnaporthe oryzae MGG_06881 N 0.743
fgenesh1_pg.00082_#_116 Aspergillus carbonarius fgenesh1_pg.00082_#_116 N 0.743
estExt_Genewise1Plus.C_70091 Cryphonectria parasitica estExt_Genewise1Plus.C_70091 N 0.736
BC1G_12993 Botrytis cinerea BC1G_12993 N 0.736
estExt_fgenesh1_pg.C_10265 Neurospora tetrasperma estExt_fgenesh1_pg.C_10265 N 0.729
estExt_fgenesh3_pm.C_10926 Neurospora discreta estExt_fgenesh3_pm.C_10926 N 0.729
estExt_Genewise1.C_23240 Thielavia terrestris estExt_Genewise1.C_23240 N 0.729
NCU12158 Neurospora crassa NCU12158 N 0.729
gw1.3.2310.1 Myceliophthora thermophila gw1.3.2310.1 N 0.729
Pa_2_12560 Podospora anserina Pa_2_12560 N 0.721
CHGG_07099 Chaetomium globosum CHGG_07099 N 0.714
GLRG_03331 Colletotrichum graminicola GLRG_03331 N 0.714
TESG_02793 Trichophyton tonsurans TESG_02793 N 0.714
VDBG_00519 Verticillium albo atrum VDBG_00519 N 0.707