gw1.6.1353.1 (Mycosphaerella graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.6.1353.1 T53324_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.6.1353.1 RRM 2 70
gw1.6.1353.1 RRM 86 144

Links

Other RRM family RBPs
Other Mycosphaerella graminicola RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_500038 Mycosphaerella fijiensis estExt_Genewise1Plus.C_500038 N 0.915
ACLA_068230 Aspergillus clavatus CADACLAG00007015 N 0.846
NFIA_082870 Neosartorya fischeri CADNFIAG00006872 N 0.846
AFUA_2G06090 Aspergillus fumigatus CADAFUAG00003703 N 0.838
MCYG_04652 Microsporum canis MCYG_04652 N 0.835
ARB_05069 Arthroderma benhamiae ARB_05069 N 0.835
TERG_03265 Trichophyton rubrum TERG_03265 N 0.835
PMAA_028640 Penicillium marneffei PMAA_028640 N 0.822
HCAG_03640 Histoplasma capsulatum HCAG_03640 N 0.820
TEQG_02438 Trichophyton equinum TEQG_02438 N 0.820
BDBG_05401 Blastomyces dermatitidis BDBG_05401 N 0.813
TRV_06675 Trichophyton verrucosum TRV_06675 N 0.805
CIMG_00990 Coccidioides immitis CIMG_00990 N 0.791
UREG_00938 Uncinocarpus reesii UREG_00938 N 0.791
ANIA_10941 Aspergillus nidulans CADANIAG00000536 N 0.791
CPSG_02224 Coccidioides posadasii CPSG_02224 N 0.791
AO090001000725 Aspergillus oryzae CADAORAG00000662 N 0.784
AFLA_130230 Aspergillus flavus CADAFLAG00010081 N 0.784
ATEG_06805 Aspergillus terreus CADATEAG00006229 N 0.784
An02g14690 Aspergillus niger CADANGAG00002994 N 0.784
SS1G_05220 Sclerotinia sclerotiorum SS1G_05220 N 0.777
GSTUMT00005496001 Tuber melanosporum GSTUMT00005496001 N 0.771
Pc22g08010 Penicillium chrysogenum Pc22g08010 N 0.770
BC1G_12993 Botrytis cinerea BC1G_12993 N 0.763
MGG_06881 Magnaporthe oryzae MGG_06881 N 0.748
gw1.3.2310.1 Myceliophthora thermophila gw1.3.2310.1 N 0.748
estExt_fgenesh3_pm.C_10926 Neurospora discreta estExt_fgenesh3_pm.C_10926 N 0.748
estExt_fgenesh1_pg.C_10265 Neurospora tetrasperma estExt_fgenesh1_pg.C_10265 N 0.748
NCU12158 Neurospora crassa NCU12158 N 0.748
estExt_Genewise1.C_23240 Thielavia terrestris estExt_Genewise1.C_23240 N 0.748
fgenesh1_pg.00082_#_116 Aspergillus carbonarius fgenesh1_pg.00082_#_116 N 0.748
AB01113.1 Alternaria brassicicola AB01113.1 N 0.746
TESG_02793 Trichophyton tonsurans TESG_02793 N 0.742
Pa_2_12560 Podospora anserina Pa_2_12560 N 0.741
estExt_Genewise1Plus.C_240153 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_240153 N 0.741
CHGG_07099 Chaetomium globosum CHGG_07099 N 0.734
FOXG_05191 Fusarium oxysporum FOXG_05191 N 0.734
estExt_GeneWisePlus.C_210250 Trichoderma reesei estExt_GeneWisePlus.C_210250 N 0.734
GLRG_03331 Colletotrichum graminicola GLRG_03331 N 0.734
FVEG_02942 Fusarium verticillioides FVEG_02942 N 0.734
VDBG_00519 Verticillium albo atrum VDBG_00519 N 0.727
FGSG_13728 Fusarium graminearum FGSG_13728 N 0.727
estExt_fgenesh1_pg.C_40107 Trichoderma atroviride estExt_fgenesh1_pg.C_40107 N 0.727
e_gw1.5.1166.1 Nectria haematococca e_gw1.5.1166.1 N 0.719
estExt_Genewise1Plus.C_70091 Cryphonectria parasitica estExt_Genewise1Plus.C_70091 N 0.719
estExt_Genewise1Plus.C_230018 Trichoderma virens estExt_Genewise1Plus.C_230018 N 0.719