BGIOSIBCE008701 (Oryza indica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIOSIBCE008701 T32917_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.710
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE008701 RRM 48 116

Links

Other RRM family RBPs
Other Oryza indica RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os02g51890 Oryza sativa LOC_Os02g51890 I 1.000
BRADI3G58710 Brachypodium distachyon BRADI3G58710 I 0.841
BRADI1G45540 Brachypodium distachyon BRADI1G45540 I 0.826
GRMZM2G073700 Zea mays GRMZM2G073700 I 0.812
LOC_Os06g11730 Oryza sativa LOC_Os06g11730 I 0.797
GRMZM2G303915 Zea mays GRMZM2G303915 I 0.768
cassava23406.valid.m1 Manihot esculenta cassava23406.valid.m1 I 0.725
Cucsa.311530 Cucumis sativus Cucsa.311530 I 0.725
cassava23405.valid.m1 Manihot esculenta cassava23405.valid.m1 I 0.725
AT1G76460-TAIR-G Arabidopsis thaliana AT1G76460-TAIR-G D 0.710
MDP0000138486 Malus x domestica MDP0000138486 I 0.710
ppa009964m Prunus persica ppa009964m I 0.710