GRMZM2G303915 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G303915 T54204_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.765
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G303915_P01 RRM 49 116
GRMZM2G303915_P02 RRM 49 116
GRMZM2G303915_P03 RRM 49 116

Links

Other RRM family RBPs
Other Zea mays RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI3G58710 Brachypodium distachyon BRADI3G58710 I 0.853
GRMZM2G073700 Zea mays GRMZM2G073700 I 0.841
BRADI1G45540 Brachypodium distachyon BRADI1G45540 I 0.826
LOC_Os06g11730 Oryza sativa LOC_Os06g11730 I 0.812
LOC_Os02g51890 Oryza sativa LOC_Os02g51890 I 0.768
BGIOSIBCE008701 Oryza indica BGIOSIBCE008701 I 0.768
AT1G76460-TAIR-G Arabidopsis thaliana AT1G76460-TAIR-G D 0.765
XM_002889039.1 Arabidopsis lyrata fgenesh2_kg.2__1933__AT1G76460.1 I 0.735
Glyma04g01590.1 Glycine max Glyma04g01590.1 I 0.735
ppa009964m Prunus persica ppa009964m I 0.735
Glyma06g01670.1 Glycine max Glyma06g01670.1 I 0.735
LOC_Os02g48340 Oryza sativa LOC_Os02g48340 I 0.721
B9GRQ8_POPTR Populus trichocarpa POPTR_0002s17990 I 0.721
BGIOSIBCE008410 Oryza indica BGIOSIBCE008410 I 0.721
MDP0000488395 Malus x domestica MDP0000488395 I 0.721
Glyma06g14020.1 Glycine max Glyma06g14020.1 N 0.721
MDP0000548950 Malus x domestica MDP0000548950 I 0.721
MDP0000744398 Malus x domestica MDP0000744398 I 0.721
Cucsa.348630 Cucumis sativus Cucsa.348630 I 0.721
cassava23406.valid.m1 Manihot esculenta cassava23406.valid.m1 I 0.710
cassava23405.valid.m1 Manihot esculenta cassava23405.valid.m1 I 0.710
cassava32990.m1 Manihot esculenta cassava32990.m1 I 0.706
Cucsa.005270 Cucumis sativus Cucsa.005270 I 0.706
cassava44391.m1 Manihot esculenta cassava44391.m1 I 0.706
GSVIVG00009045001 Vitis vinifera GSVIVG00009045001 I 0.706
ppa016222m Prunus persica ppa016222m I 0.706
MDP0000138486 Malus x domestica MDP0000138486 I 0.706
LjSGA_018073.2 Lotus japonicus LjSGA_018073.2 I 0.706
Medtr3g159840 Medicago truncatula Medtr3g159840 I 0.706
PK14266.1 Cannabis sativa PK14266.1 I 0.706
AT1G20880 Arabidopsis thaliana AT1G20880-TAIR-G I 0.706
A9PAJ1_POPTR Populus trichocarpa POPTR_0014s10090 I 0.706
B9H5W4_POPTR Populus trichocarpa POPTR_0005s27810 I 0.706
GSVIVG00027434001 Vitis vinifera GSVIVG00027434001 I 0.706
30076.m004440 Ricinus communis 30076.m004440 I 0.706