CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CPIJ011735
(
Culex quinquefasciatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CPIJ011735
T34289_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPIJ011735-PA
RRM
1325
1389
LLLKNLTSQIDGATLRTLCMQHGPLQSLQLYPNHGLALCKYSSREEASKAQQALNNCPLGSTNIG
Links
Other
RRM
family RBPs
Other
Culex quinquefasciatus
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ011735
Culex pipiens
CpipJ_CPIJ011735
N
1.000
AAEL007449
Aedes aegypti
AAEL007449
N
0.877
AAEL007436
Aedes aegypti
AAEL007436
N
0.785
AGAP007802
Anopheles gambiae
AGAP007802
N
0.769
CpipJ_CPIJ010645
Culex pipiens
CpipJ_CPIJ010645
N
0.769
GL18179
Drosophila persimilis
FBgn0155782
N
0.769
GA16600-RA
Drosophila pseudoobscura
FBgn0076615
N
0.769
CPIJ010645
Culex quinquefasciatus
CPIJ010645
N
0.769
AAEL801228
Aedes aegypti
AAEL007447
N
0.738
amel4_ncbi_hmm5263
Apis mellifera
amel4_ncbi_hmm5263
N
0.738
AGAP007803
Anopheles gambiae
AGAP007803
N
0.723
GJ14351
Drosophila virilis
FBgn0201564
N
0.723
GH23931
Drosophila grimshawi
FBgn0131388
N
0.723
GF19039
Drosophila ananassae
FBgn0096051
N
0.723
GM26772
Drosophila sechellia
FBgn0181625
N
0.723
GD24374
Drosophila simulans
FBgn0195715
N
0.723
GK13697
Drosophila willistoni
FBgn0215705
N
0.723
gw
Drosophila melanogaster
FBgn0051992
N
0.723
GE14506
Drosophila yakuba
FBgn0232110
N
0.708
GG16439
Drosophila erecta
FBgn0108670
N
0.708
DGIL_AUG5s11561g1t1
Acyrtosiphon pisum
DGIL_AUG5s11561g1t1
N
0.708