CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER2
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000008443
T34658_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000008286
RRM
21
84
VLIRNLPAESSSQEIHDLLKDFELKYCYVDKNKRTAFVTLLNGEQAQNAIQLFHQHTLRGKEIS
ENSACAP00000008286
RRM
94
164
LCITNLPTSYTLQEFEELVRPYGNVERHFLIYSEVTGYSKGYGFVEYMKKDSAAKARLDLLGKQLGGNVLF
ENSACAP00000008286
RRM
183
253
LCIENLPVDCTDSNELVQTFSAKPKPVFYQLAQEEDSSVGGFAVVEYETAEQAEEVQQSTDGLTIKGKSVH
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER2
Oryctolagus cuniculus
ENSOCUG00000006221
N
0.752
RAVER2
Bos taurus
ENSBTAG00000030686
N
0.748
RAVER2
Macropus eugenii
ENSMEUG00000012740
N
0.728
ENSPPYG00000001271
Pongo pygmaeus
ENSPPYG00000001271
N
0.718
RAVER2
Pan troglodytes
ENSPTRG00000000824
N
0.718
RAVER2
Homo sapiens
ENSG00000162437
N
0.718
RAVER2
Macaca mulatta
ENSMMUG00000018565
N
0.718
Raver2
Rattus norvegicus
ENSRNOG00000023812
N
0.714
Raver2
Mus musculus
ENSMUSG00000035275
N
0.714
RAVER2
Gallus gallus
ENSGALG00000011026
N
0.709
LOC100406727
Callithrix jacchus
ENSCJAG00000016724
N
0.709
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.704