CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Raver2
(
Mus musculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMUSG00000035275
T39335_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000043142
RRM
60
123
ILVKNLPQDSSSQEVHELLQDYELKYCYVDRNKRTAFVTLLNGEQAQSAIQRFHQFSFRGRELT
ENSMUSP00000043142
RRM
133
202
LCITNLPISFTLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQMGASAL
ENSMUSP00000043142
RRM
222
292
LCIDKLPSDYSDSEELLQLFSGIHKPVFCQLAQDEGSHGGGFAVVEYSTAEHAEEVQQVADGITIKGSQVQ
ENSMUSP00000102568
RRM
60
123
ILVKNLPQDSSSQEVHELLQDYELKYCYVDRNKRTAFVTLLNGEQAQSAIQRFHQFSFRGRELT
ENSMUSP00000102568
RRM
133
202
LCITNLPISFTLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQMGASAL
ENSMUSP00000102568
RRM
222
292
LCIDKLPSDYSDSEELLQLFSGIHKPVFCQLAQDEGSHGGGFAVVEYSTAEHAEEVQQVADGITIKGSQVQ
Links
Other
RRM
family RBPs
Other
Mus musculus
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Raver2
Rattus norvegicus
ENSRNOG00000023812
N
0.990
RAVER2
Bos taurus
ENSBTAG00000030686
N
0.893
RAVER2
Homo sapiens
ENSG00000162437
N
0.883
RAVER2
Pan troglodytes
ENSPTRG00000000824
N
0.883
ENSPPYG00000001271
Pongo pygmaeus
ENSPPYG00000001271
N
0.883
RAVER2
Macaca mulatta
ENSMMUG00000018565
N
0.883
LOC100406727
Callithrix jacchus
ENSCJAG00000016724
N
0.868
RAVER2
Equus caballus
ENSECAG00000022014
N
0.820
RAVER2
Oryctolagus cuniculus
ENSOCUG00000006221
N
0.816
RAVER2
Loxodonta africana
ENSLAFG00000012508
N
0.805
RAVER2
Gorilla gorilla
ENSGGOG00000016447
N
0.800
RAVER2
Canis familiaris
ENSCAFG00000018617
N
0.800
RAVER2
Pteropus vampyrus
ENSPVAG00000007172
N
0.790
RAVER2
Tupaia belangeri
ENSTBEG00000009004
N
0.790
RAVER2
Tarsius syrichta
ENSTSYG00000006019
N
0.785
RAVER2
Macropus eugenii
ENSMEUG00000012740
N
0.772
Raver2
Dipodomys ordii
ENSDORG00000002498
N
0.767
Ame_R013192
Ailuropoda melanoleuca
Ame_R013192
N
0.751
RAVER2
Otolemur garnettii
ENSOGAG00000011157
N
0.743
RAVER2
Choloepus hoffmanni
ENSCHOG00000007668
N
0.737
RAVER2
Monodelphis domestica
ENSMODG00000001242
N
0.732
RAVER2
Gallus gallus
ENSGALG00000011026
N
0.714
RAVER2
Anolis carolinensis
ENSACAG00000008443
N
0.714
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.714