CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER2
(
Macropus eugenii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMEUG00000012740
T38250_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000011624
RRM
66
129
VLLRNLPPDTHSQEVHDLLKDYELKYCYVDRNKRTAFVTLLDGEQAQNAIQTFHQYSLRGKEIT
ENSMEUP00000011624
RRM
139
209
LCITNLPPSFTIEEFEELVRTFGNIERCFLVYNEITGHSKGYGFVEYMKKDSAAKARSELLGKQLGGFTLF
ENSMEUP00000011624
RRM
228
298
LCIDKLPRDFTDSQELLQVFSFSHKPVFGQLAQDEGNYAGGFAVLEYDTAEHAEDVQQVADGMMIKGNQVQ
Links
Other
RRM
family RBPs
Other
Macropus eugenii
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER2
Monodelphis domestica
ENSMODG00000001242
N
0.850
RAVER2
Macaca mulatta
ENSMMUG00000018565
N
0.786
RAVER2
Bos taurus
ENSBTAG00000030686
N
0.782
RAVER2
Pan troglodytes
ENSPTRG00000000824
N
0.782
ENSPPYG00000001271
Pongo pygmaeus
ENSPPYG00000001271
N
0.782
RAVER2
Homo sapiens
ENSG00000162437
N
0.772
Raver2
Mus musculus
ENSMUSG00000035275
N
0.772
LOC100406727
Callithrix jacchus
ENSCJAG00000016724
N
0.772
Raver2
Rattus norvegicus
ENSRNOG00000023812
N
0.772
RAVER2
Oryctolagus cuniculus
ENSOCUG00000006221
N
0.762
RAVER2
Equus caballus
ENSECAG00000022014
N
0.733
RAVER2
Gallus gallus
ENSGALG00000011026
N
0.733
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.733
RAVER2
Gorilla gorilla
ENSGGOG00000016447
N
0.728
RAVER2
Anolis carolinensis
ENSACAG00000008443
N
0.728
RAVER2
Loxodonta africana
ENSLAFG00000012508
N
0.723
Raver2
Dipodomys ordii
ENSDORG00000002498
N
0.714
RAVER2
Pteropus vampyrus
ENSPVAG00000007172
N
0.714
RAVER2
Canis familiaris
ENSCAFG00000018617
N
0.714
RAVER2
Tupaia belangeri
ENSTBEG00000009004
N
0.704