LOC100406727 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000016724 T35636_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000030794 RRM 1 62
ENSCJAP00000030794 RRM 72 141
ENSCJAP00000030794 RRM 161 231
ENSCJAP00000030795 RRM 71 134
ENSCJAP00000030795 RRM 144 213
ENSCJAP00000030795 RRM 233 303

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000001271 Pongo pygmaeus ENSPPYG00000001271 N 0.966
RAVER2 Macaca mulatta ENSMMUG00000018565 N 0.966
RAVER2 Pan troglodytes ENSPTRG00000000824 N 0.961
RAVER2 Homo sapiens ENSG00000162437 N 0.956
RAVER2 Bos taurus ENSBTAG00000030686 N 0.927
RAVER2 Gorilla gorilla ENSGGOG00000016447 N 0.877
Raver2 Rattus norvegicus ENSRNOG00000023812 N 0.868
Raver2 Mus musculus ENSMUSG00000035275 N 0.868
RAVER2 Oryctolagus cuniculus ENSOCUG00000006221 N 0.864
RAVER2 Equus caballus ENSECAG00000022014 N 0.862
RAVER2 Loxodonta africana ENSLAFG00000012508 N 0.852
RAVER2 Canis familiaris ENSCAFG00000018617 N 0.847
RAVER2 Tupaia belangeri ENSTBEG00000009004 N 0.837
RAVER2 Tarsius syrichta ENSTSYG00000006019 N 0.833
RAVER2 Pteropus vampyrus ENSPVAG00000007172 N 0.828
Raver2 Dipodomys ordii ENSDORG00000002498 N 0.804
RAVER2 Choloepus hoffmanni ENSCHOG00000007668 N 0.783
Ame_R013192 Ailuropoda melanoleuca Ame_R013192 N 0.783
RAVER2 Otolemur garnettii ENSOGAG00000011157 N 0.775
RAVER2 Macropus eugenii ENSMEUG00000012740 N 0.772
RAVER2 Monodelphis domestica ENSMODG00000001242 N 0.749
RAVER2 Ornithorhynchus anatinus ENSOANG00000008327 N 0.729
RAVER2 Gallus gallus ENSGALG00000011026 N 0.725
RAVER2 Meleagris gallopavo ENSMGAG00000011806 N 0.725
RAVER2 Cavia porcellus ENSCPOG00000005986 N 0.709
RAVER2 Anolis carolinensis ENSACAG00000008443 N 0.709