CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DAZL
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000003145
T41875_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000003244
RRM
37
104
VFVAGVDLRMNEAEIRSVFEQYGTVKEVKVITDRSGVSKGYGFVSFLDNVDVQKIVESQINFHGKKLK
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DAZL_CHICK
Gallus gallus
ENSGALG00000011243
N
0.868
ENSMGAG00000010878
Meleagris gallopavo
ENSMGAG00000010878
N
0.868
ENSEEUG00000005973
Erinaceus europaeus
ENSEEUG00000005973
N
0.794
DAZL
Homo sapiens
ENSG00000092345
N
0.794
ENSOCUG00000012635
Oryctolagus cuniculus
ENSOCUG00000012635
N
0.794
Dazl
Mus musculus
ENSMUSG00000010592
N
0.794
XM_001380213.1
Monodelphis domestica
ENSMODG00000014730
N
0.794
DAZL
Loxodonta africana
ENSLAFG00000009132
N
0.794
DAZL
Gorilla gorilla
ENSGGOG00000023632
N
0.794
O77586_MACMU
Macaca mulatta
ENSMMUG00000011361
N
0.794
A3DUJ0_BOVIN
Bos taurus
ENSBTAG00000000502
N
0.794
ENSCAFG00000005867
Canis familiaris
ENSCAFG00000005867
N
0.794
Dazl
Rattus norvegicus
ENSRNOG00000023474
N
0.794
DAZL
Pteropus vampyrus
ENSPVAG00000007836
N
0.794
ENSSARG00000008473
Sorex araneus
ENSSARG00000008473
N
0.794
Ame_R003159
Ailuropoda melanoleuca
Ame_R003159
N
0.794
ENSTBEG00000012225
Tupaia belangeri
ENSTBEG00000012225
N
0.794
ENSOGAG00000006983
Otolemur garnettii
ENSOGAG00000006983
N
0.794
O77584_PANTR
Pan troglodytes
ENSPTRG00000014674
N
0.794
ENSPPYG00000014080
Pongo pygmaeus
ENSPPYG00000014080
N
0.794
DAZL
Procavia capensis
ENSPCAG00000016182
N
0.794
ENSVPAG00000000468
Vicugna pacos
ENSVPAG00000000468
N
0.779
ENSCPOG00000007628
Cavia porcellus
ENSCPOG00000007628
N
0.779
Dazl
Dipodomys ordii
ENSDORG00000011497
N
0.779
LOC100063430
Equus caballus
ENSECAG00000010923
N
0.779
ENSTSYG00000000788
Tarsius syrichta
ENSTSYG00000000788
N
0.779
DAZ4
Homo sapiens
ENSG00000205916
N
0.735
DAZ2
Homo sapiens
ENSG00000205944
N
0.735
DAZ3
Homo sapiens
ENSG00000187191
N
0.735
DAZ1
Homo sapiens
ENSG00000188120
N
0.735
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000023120
N
0.721
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000028811
N
0.721
AAC41242
Xenopus laevis
AAC41242
N
0.721
dazl
Xenopus tropicalis
ENSXETG00000025199
N
0.721
Q9TV38_PANTR
Pan troglodytes
ENSPTRG00000022523
N
0.721
Q9TV38_PANTR
Pan troglodytes
ENSPTRG00000033761
N
0.721
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000022519
N
0.721
AAI70359
Xenopus laevis
AAI70359
N
0.721
O57437
Xenopus laevis
O57437
N
0.721
AAI70361
Xenopus laevis
AAI70361
N
0.721
DAZL
Choloepus hoffmanni
ENSCHOG00000005264
N
0.706
Q4V7Y4
Xenopus laevis
Q4V7Y4
N
0.706
AAH97658
Xenopus laevis
AAH97658
N
0.706
AAH71023
Xenopus laevis
AAH71023
N
0.706