PUF60 (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000014613 T35868_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000013167 RRM 121 191
ENSCPOP00000013167 RRM 218 288
ENSCPOP00000013167 RRM 501 537

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PUF60 Tarsius syrichta ENSTSYG00000011912 N 0.926
PUF60 Ochotona princeps ENSOPRG00000002147 N 0.874
PUF60 Meleagris gallopavo ENSMGAG00000013070 N 0.869
Puf60 Dipodomys ordii ENSDORG00000004585 N 0.869
PUF60 Taeniopygia guttata ENSTGUG00000012797 N 0.869
PUF60 Anolis carolinensis ENSACAG00000001645 N 0.869
Q5F3W7_CHICK Gallus gallus ENSGALG00000014089 N 0.869
PUF60 Monodelphis domestica ENSMODG00000009161 N 0.869
Puf60 Rattus norvegicus ENSRNOG00000009960 N 0.864
PUF60 Homo sapiens ENSG00000179950 N 0.864
PUF60 Felis catus ENSFCAG00000001045 N 0.864
PUF60_BOVIN Bos taurus ENSBTAG00000037493 N 0.864
Ame_R010349 Ailuropoda melanoleuca Ame_R010349 N 0.864
LOC100065550 Equus caballus ENSECAG00000024681 N 0.864
PUF60 Gorilla gorilla ENSGGOG00000004646 N 0.864
PUF60 Canis familiaris ENSCAFG00000001400 N 0.864
LOC100394446 Callithrix jacchus ENSCJAG00000021485 N 0.864
Puf60 Mus musculus ENSMUSG00000002524 N 0.864
PUF60 Macaca mulatta ENSMMUG00000013558 N 0.864
PUF60 Tursiops truncatus ENSTTRG00000017088 N 0.859
PUF60 Pan troglodytes ENSPTRG00000020670 N 0.859
puf60 Xenopus tropicalis ENSXETG00000012469 N 0.845
PUF60 Loxodonta africana ENSLAFG00000022929 N 0.840
ENSMLUG00000013032 Myotis lucifugus ENSMLUG00000013032 N 0.835
puf60b Danio rerio ENSDARG00000001241 N 0.811
puf60a Danio rerio ENSDARG00000032175 N 0.806
PUF60 Oryzias latipes ENSORLG00000012279 N 0.786
PUF60 Takifugu rubripes ENSTRUG00000005420 N 0.786
PUF60 Tetraodon nigroviridis ENSTNIG00000013675 N 0.786
PUF60 Takifugu rubripes ENSTRUG00000008843 N 0.762
PUF60 Tetraodon nigroviridis ENSTNIG00000003069 N 0.732
PUF60 Ornithorhynchus anatinus ENSOANG00000006962 N 0.723
PUF60 Gasterosteus aculeatus ENSGACG00000001484 N 0.713