PUF60 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000179950 T37326_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000322016 RRM 131 201
ENSP00000322016 RRM 228 298
ENSP00000322016 RRM 480 543
ENSP00000322036 RRM 114 184
ENSP00000322036 RRM 211 281
ENSP00000322036 RRM 463 526
ENSP00000395417 RRM 102 172
ENSP00000395417 RRM 199 269
ENSP00000395417 RRM 451 514
ENSP00000402953 RRM 88 158
ENSP00000402953 RRM 185 255
ENSP00000402953 RRM 437 500

Links

Other RRM family RBPs
Other Homo sapiens RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100065550 Equus caballus ENSECAG00000024681 N 1.000
LOC100394446 Callithrix jacchus ENSCJAG00000021485 N 1.000
PUF60 Macaca mulatta ENSMMUG00000013558 N 1.000
Ame_R010349 Ailuropoda melanoleuca Ame_R010349 N 1.000
PUF60 Canis familiaris ENSCAFG00000001400 N 1.000
PUF60 Felis catus ENSFCAG00000001045 N 1.000
PUF60 Gorilla gorilla ENSGGOG00000004646 N 1.000
PUF60 Pan troglodytes ENSPTRG00000020670 N 0.995
PUF60 Taeniopygia guttata ENSTGUG00000012797 N 0.995
PUF60 Anolis carolinensis ENSACAG00000001645 N 0.995
PUF60_BOVIN Bos taurus ENSBTAG00000037493 N 0.995
Puf60 Dipodomys ordii ENSDORG00000004585 N 0.995
Q5F3W7_CHICK Gallus gallus ENSGALG00000014089 N 0.995
PUF60 Meleagris gallopavo ENSMGAG00000013070 N 0.995
PUF60 Monodelphis domestica ENSMODG00000009161 N 0.995
PUF60 Tursiops truncatus ENSTTRG00000017088 N 0.990
Puf60 Mus musculus ENSMUSG00000002524 N 0.990
Puf60 Rattus norvegicus ENSRNOG00000009960 N 0.990
puf60 Xenopus tropicalis ENSXETG00000012469 N 0.971
PUF60 Loxodonta africana ENSLAFG00000022929 N 0.966
ENSMLUG00000013032 Myotis lucifugus ENSMLUG00000013032 N 0.951
puf60a Danio rerio ENSDARG00000032175 N 0.937
PUF60 Ochotona princeps ENSOPRG00000002147 N 0.927
puf60b Danio rerio ENSDARG00000001241 N 0.922
PUF60 Takifugu rubripes ENSTRUG00000005420 N 0.913
PUF60 Tetraodon nigroviridis ENSTNIG00000013675 N 0.913
PUF60 Oryzias latipes ENSORLG00000012279 N 0.913
PUF60 Tarsius syrichta ENSTSYG00000011912 N 0.893
PUF60 Takifugu rubripes ENSTRUG00000008843 N 0.874
PUF60 Cavia porcellus ENSCPOG00000014613 N 0.864
PUF60 Ornithorhynchus anatinus ENSOANG00000006962 N 0.850
PUF60 Tetraodon nigroviridis ENSTNIG00000003069 N 0.837
PUF60 Microcebus murinus ENSMICG00000012226 N 0.806
PUF60 Gasterosteus aculeatus ENSGACG00000001484 N 0.804
fgenesh2_pm.scaffold_205000003 Branchiostoma floridae fgenesh2_pm.scaffold_205000003 N 0.791
XP_785572.1 Strongylocentrotus purpuratus XP_785572.1 N 0.752
XP_001191956.1 Strongylocentrotus purpuratus XP_001191956.1 N 0.752
ISCW004373 Ixodes scapularis ISCW004373 N 0.734
e_gw1.9.204.1 Lottia gigantea e_gw1.9.204.1 N 0.702