ELAVL1 (Macropus eugenii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMEUG00000010702 T38237_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.801
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.801
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.801
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.801
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.801
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.801
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMEUP00000009764 RRM 20 88
ENSMEUP00000009764 RRM 137 172
ENSMEUP00000009764 RRM 242 312

Links

Other RRM family RBPs
Other Macropus eugenii RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ELAVL1 Sorex araneus ENSSARG00000013091 I 0.966
ELAVL2 Dasypus novemcinctus ENSDNOG00000016605 I 0.803
ELAVL2 Erinaceus europaeus ENSEEUG00000008733 I 0.803
ENSCAFG00000018353 Canis familiaris ENSCAFG00000018353 I 0.801
ELAVL1 Pan troglodytes ENSPTRG00000010413 I 0.801
Ame_R010167 Ailuropoda melanoleuca Ame_R010167 I 0.801
Q3ZCE2_BOVIN Bos taurus ENSBTAG00000000613 I 0.801
ENSPPYG00000009496 Pongo pygmaeus ENSPPYG00000009496 I 0.801
ELAVL1 Gorilla gorilla ENSGGOG00000006100 I 0.801
ELAVL1 Tarsius syrichta ENSTSYG00000008248 I 0.801
ELAVL1 Loxodonta africana ENSLAFG00000004219 I 0.801
ELAVL1 Monodelphis domestica ENSMODG00000005041 I 0.801
ELAVL1 Macaca mulatta ENSMMUG00000006544 I 0.801
ELAVL1 Microcebus murinus ENSMICG00000009699 I 0.801
ELAVL1 Felis catus ENSFCAG00000014947 I 0.801
ELAVL1 Homo sapiens ENSG00000066044 D 0.801
ELAVL1 Otolemur garnettii ENSOGAG00000012877 I 0.801
LOC100060819 Equus caballus ENSECAG00000019459 I 0.796
Q9PW24_CHICK Gallus gallus ENSGALG00000000726 I 0.796
ELAVL1 Meleagris gallopavo ENSMGAG00000001015 I 0.796
ELAVL1 Taeniopygia guttata ENSTGUG00000000118 I 0.796
ELAVL1 Myotis lucifugus ENSMLUG00000008101 I 0.796
D7R608_RABIT Oryctolagus cuniculus ENSOCUG00000015871 I 0.791
ELAVL1 Dasypus novemcinctus ENSDNOG00000008797 I 0.791
Elavl1 Dipodomys ordii ENSDORG00000009158 I 0.791
ELAVL1 Ochotona princeps ENSOPRG00000009691 I 0.791
Elavl1 Mus musculus ENSMUSG00000040028 I 0.791
Elavl1 Rattus norvegicus ENSRNOG00000001069 I 0.791
ELAVL1 Sus scrofa ENSSSCG00000013592 I 0.787
elavl1 Xenopus tropicalis ENSXETG00000008752 I 0.782
ELAVL1 Spermophilus tridecemlineatus ENSSTOG00000009130 I 0.782
Q5U259 Xenopus laevis Q5U259 I 0.782
AAH86269 Xenopus laevis AAH86269 I 0.782
AAA96942 Xenopus laevis AAA96942 I 0.777
AAI16460 Xenopus laevis AAI16460 I 0.739
Q1JQ73 Xenopus laevis Q1JQ73 I 0.739
elavl1 Danio rerio ENSDARG00000038695 I 0.722
ELAVL1 Oryzias latipes ENSORLG00000012435 I 0.718
hug Danio rerio ENSDARG00000016405 I 0.712
ELAVL1 Gasterosteus aculeatus ENSGACG00000010657 I 0.707
ELAVL1 Gasterosteus aculeatus ENSGACG00000013329 I 0.703