ELAVL1 (Sorex araneus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSARG00000013091 T41371_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.820
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.820
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.820
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.820
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.820
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.820
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000011830 RRM 22 92
ENSSARP00000011830 RRM 141 176
ENSSARP00000011830 RRM 246 316

Links

Other RRM family RBPs
Other Sorex araneus RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ELAVL1 Macropus eugenii ENSMEUG00000010702 I 0.966
ELAVL2 Dasypus novemcinctus ENSDNOG00000016605 I 0.820
ELAVL2 Erinaceus europaeus ENSEEUG00000008733 I 0.820
ELAVL1 Microcebus murinus ENSMICG00000009699 I 0.820
ELAVL1 Loxodonta africana ENSLAFG00000004219 I 0.820
ELAVL1 Gorilla gorilla ENSGGOG00000006100 I 0.820
ELAVL1 Felis catus ENSFCAG00000014947 I 0.820
ELAVL1 Macaca mulatta ENSMMUG00000006544 I 0.820
ELAVL1 Monodelphis domestica ENSMODG00000005041 I 0.820
ELAVL1 Pan troglodytes ENSPTRG00000010413 I 0.820
ENSPPYG00000009496 Pongo pygmaeus ENSPPYG00000009496 I 0.820
ELAVL1 Otolemur garnettii ENSOGAG00000012877 I 0.820
ENSCAFG00000018353 Canis familiaris ENSCAFG00000018353 I 0.820
ELAVL1 Homo sapiens ENSG00000066044 D 0.820
Q3ZCE2_BOVIN Bos taurus ENSBTAG00000000613 I 0.820
ELAVL1 Tarsius syrichta ENSTSYG00000008248 I 0.820
Ame_R010167 Ailuropoda melanoleuca Ame_R010167 I 0.820
LOC100060819 Equus caballus ENSECAG00000019459 I 0.815
Q9PW24_CHICK Gallus gallus ENSGALG00000000726 I 0.815
ELAVL1 Taeniopygia guttata ENSTGUG00000000118 I 0.815
ELAVL1 Myotis lucifugus ENSMLUG00000008101 I 0.815
ELAVL1 Meleagris gallopavo ENSMGAG00000001015 I 0.815
Elavl1 Mus musculus ENSMUSG00000040028 I 0.810
D7R608_RABIT Oryctolagus cuniculus ENSOCUG00000015871 I 0.810
ELAVL1 Ochotona princeps ENSOPRG00000009691 I 0.810
ELAVL1 Dasypus novemcinctus ENSDNOG00000008797 I 0.810
Elavl1 Rattus norvegicus ENSRNOG00000001069 I 0.810
Elavl1 Dipodomys ordii ENSDORG00000009158 I 0.810
ELAVL1 Sus scrofa ENSSSCG00000013592 I 0.806
AAH86269 Xenopus laevis AAH86269 I 0.801
ELAVL1 Spermophilus tridecemlineatus ENSSTOG00000009130 I 0.801
elavl1 Xenopus tropicalis ENSXETG00000008752 I 0.801
Q5U259 Xenopus laevis Q5U259 I 0.801
AAA96942 Xenopus laevis AAA96942 I 0.796
AAI16460 Xenopus laevis AAI16460 I 0.757
Q1JQ73 Xenopus laevis Q1JQ73 I 0.757
elavl1 Danio rerio ENSDARG00000038695 I 0.741
ELAVL1 Oryzias latipes ENSORLG00000012435 I 0.737
hug Danio rerio ENSDARG00000016405 I 0.731
ELAVL1 Gasterosteus aculeatus ENSGACG00000010657 I 0.726
ELAVL1 Gasterosteus aculeatus ENSGACG00000013329 I 0.722
ELAVL1 Oryzias latipes ENSORLG00000000087 I 0.717
ELAVL1 Tetraodon nigroviridis ENSTNIG00000019823 I 0.712
ELAVL1 Takifugu rubripes ENSTRUG00000004559 I 0.703