A1CF (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000003377 T38484_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSGALG00000003765
M244_0.6 		Gallus gallus DUAAUUV RNAcompete
Ray et al.(2013)
RNCMPT00291 		0.709
A1CF
M001_0.6 		Homo sapiens WUAAUUR RNAcompete
Ray et al.(2013)
RNCMPT00001 		0.701
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000003077 RRM 65 87
ENSMICP00000003077 RRM 145 211
ENSMICP00000003077 RRM 240 304

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A1CF Tursiops truncatus ENSTTRG00000013190 I 0.883
ENSPPYG00000002819 Pongo pygmaeus ENSPPYG00000002819 I 0.752
A1CF Choloepus hoffmanni ENSCHOG00000009089 I 0.752
A1CF Callithrix jacchus ENSCJAG00000005045 I 0.752
A1CF Macaca mulatta ENSMMUG00000007077 I 0.752
A1CF Cavia porcellus ENSCPOG00000009807 I 0.748
A1CF Tarsius syrichta ENSTSYG00000001755 I 0.748
A1CF Sus scrofa ENSSSCG00000010431 I 0.748
A1CF Equus caballus ENSECAG00000010424 I 0.748
A1CF Loxodonta africana ENSLAFG00000015462 I 0.748
A1CF Canis familiaris ENSCAFG00000015581 I 0.745
A1cf Mus musculus ENSMUSG00000052595 I 0.743
A1CF Bos taurus ENSBTAG00000021195 I 0.743
A1cf Rattus norvegicus ENSRNOG00000033195 I 0.743
A1CF Oryctolagus cuniculus ENSOCUG00000011587 I 0.738
Ame_R002153 Ailuropoda melanoleuca Ame_R002153 I 0.733
A1CF Taeniopygia guttata ENSTGUG00000005090 I 0.718
A1CF Ornithorhynchus anatinus ENSOANG00000007360 I 0.711
A1CF Meleagris gallopavo ENSMGAG00000001507 I 0.709
ENSGALG00000003765 Gallus gallus ENSGALG00000003765 D 0.709
A1CF Gorilla gorilla ENSGGOG00000009670 I 0.706
A1CF Pan troglodytes ENSPTRG00000002508 I 0.701
A1CF Homo sapiens ENSG00000148584 D 0.701