Ame_R002153 (Ailuropoda melanoleuca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Ame_R002153 T55497_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSGALG00000003765
M244_0.6 		Gallus gallus DUAAUUV RNAcompete
Ray et al.(2013)
RNCMPT00291 		0.926
A1CF
M001_0.6 		Homo sapiens WUAAUUR RNAcompete
Ray et al.(2013)
RNCMPT00001 		0.912
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R002153 RRM 58 127
Ame_R002153 RRM 138 204
Ame_R002153 RRM 233 297

Links

Other RRM family RBPs
Other Ailuropoda melanoleuca RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A1CF Choloepus hoffmanni ENSCHOG00000009089 I 0.970
ENSPPYG00000002819 Pongo pygmaeus ENSPPYG00000002819 I 0.965
A1CF Callithrix jacchus ENSCJAG00000005045 I 0.965
A1CF Equus caballus ENSECAG00000010424 I 0.965
A1CF Sus scrofa ENSSSCG00000010431 I 0.965
A1CF Loxodonta africana ENSLAFG00000015462 I 0.965
A1CF Macaca mulatta ENSMMUG00000007077 I 0.965
A1cf Rattus norvegicus ENSRNOG00000033195 I 0.960
A1CF Cavia porcellus ENSCPOG00000009807 I 0.960
A1CF Tarsius syrichta ENSTSYG00000001755 I 0.960
A1CF Bos taurus ENSBTAG00000021195 I 0.960
A1cf Mus musculus ENSMUSG00000052595 I 0.950
A1CF Oryctolagus cuniculus ENSOCUG00000011587 I 0.950
A1CF Canis familiaris ENSCAFG00000015581 I 0.950
A1CF Taeniopygia guttata ENSTGUG00000005090 I 0.936
A1CF Ornithorhynchus anatinus ENSOANG00000007360 I 0.931
ENSGALG00000003765 Gallus gallus ENSGALG00000003765 D 0.926
A1CF Meleagris gallopavo ENSMGAG00000001507 I 0.926
A1CF Gorilla gorilla ENSGGOG00000009670 I 0.917
A1CF Echinops telfairi ENSETEG00000012527 I 0.916
A1CF Homo sapiens ENSG00000148584 D 0.912
A1CF Pan troglodytes ENSPTRG00000002508 I 0.912
A1CF Anolis carolinensis ENSACAG00000015269 I 0.901
A1CF Monodelphis domestica ENSMODG00000016478 I 0.896
A1CF Macropus eugenii ENSMEUG00000015909 I 0.896
a1cf Danio rerio ENSDARG00000002968 I 0.891
A1CF Dasypus novemcinctus ENSDNOG00000002829 I 0.874
A1cf Dipodomys ordii ENSDORG00000016548 I 0.866
AAH74127 Xenopus laevis AAH74127 I 0.866
A1CF Takifugu rubripes ENSTRUG00000001982 I 0.866
A1CF Oryzias latipes ENSORLG00000013342 I 0.861
A1CF Tetraodon nigroviridis ENSTNIG00000003580 I 0.858
A1CF Vicugna pacos ENSVPAG00000006130 I 0.856
A1CF Gasterosteus aculeatus ENSGACG00000010241 I 0.856
A1CF Tursiops truncatus ENSTTRG00000013190 I 0.797
A1CF Ochotona princeps ENSOPRG00000010667 I 0.792
A1CF Felis catus ENSFCAG00000011179 I 0.787
A1CF Sorex araneus ENSSARG00000005940 I 0.779
A1CF Microcebus murinus ENSMICG00000003377 I 0.733
a1cf Xenopus tropicalis ENSXETG00000006611 I 0.713
e_gw.262.16.1 Branchiostoma floridae e_gw.262.16.1 I 0.712
XP_781163.1 Strongylocentrotus purpuratus XP_781163.1 I 0.701
XP_001196183.1 Strongylocentrotus purpuratus XP_001196183.1 I 0.701