PABPN1L (Sus scrofa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSSCG00000002647 T41401_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000002858 RRM 147 216

Links

Other RRM family RBPs
Other Sus scrofa RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PABPN1L Tursiops truncatus ENSTTRG00000004691 N 0.915
PABPN1L Bos taurus ENSBTAG00000023752 N 0.901
PABPN1L Otolemur garnettii ENSOGAG00000000433 I 0.900
PABPN1L Ochotona princeps ENSOPRG00000005597 I 0.873
LOC100051357 Equus caballus ENSECAG00000000378 I 0.871
PABPN1L Pteropus vampyrus ENSPVAG00000002716 I 0.845
EPAB2_RAT Rattus norvegicus ENSRNOG00000029558 I 0.831
PABPN1L Erinaceus europaeus ENSEEUG00000004747 N 0.831
PABPN1L Loxodonta africana ENSLAFG00000025902 I 0.817
XM_001117810.1 Macaca mulatta ENSMMUG00000029383 I 0.803
XM_001100533.1 Macaca mulatta ENSMMUG00000012438 I 0.803
PABPN1L Homo sapiens ENSG00000205022 I 0.803
PABPN1L Pan troglodytes ENSPTRG00000031120 I 0.803
ENSPPYG00000007655 Pongo pygmaeus ENSPPYG00000007655 I 0.803
PABPN1L Ornithorhynchus anatinus ENSOANG00000013901 I 0.803
PABPN1L Cavia porcellus ENSCPOG00000025951 I 0.800
PABPN1L Myotis lucifugus ENSMLUG00000003228 N 0.789
Pabpn1l Mus musculus ENSMUSG00000069867 N 0.789
PABPN1L Microcebus murinus ENSMICG00000006298 N 0.789
PABPN1 Gallus gallus ENSGALG00000006242 I 0.761
PABPN1L Anolis carolinensis ENSACAG00000013250 I 0.732
Q804A5 Xenopus laevis Q804A5 N 0.718
AAO33927 Xenopus laevis AAO33927 N 0.718
PABPN1L Monodelphis domestica ENSMODG00000003873 N 0.718
pabpn1l Xenopus tropicalis ENSXETG00000011258 I 0.704
Q6TY21 Xenopus laevis Q6TY21 I 0.704
2JWN_A Xenopus laevis 2JWN_A I 0.704
2JWN_B Xenopus laevis 2JWN_B I 0.704
AAI70311 Xenopus laevis AAI70311 I 0.704
AAR26263 Xenopus laevis AAR26263 I 0.704
AAI70309 Xenopus laevis AAI70309 I 0.704
fgenesh2_pm.scaffold_317000002 Branchiostoma floridae fgenesh2_pm.scaffold_317000002 I 0.700