ELAVL2 (Spermophilus tridecemlineatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSTOG00000007792 T41606_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.774
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.774
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.774
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		0.741
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		0.741
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		0.741
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000006982 RRM 100 139
ENSSTOP00000006982 RRM 155 223
ENSSTOP00000006982 RRM 306 371

Links

Other RRM family RBPs
Other Spermophilus tridecemlineatus RBPs

111 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ELAVL2 Microcebus murinus ENSMICG00000001558 I 0.922
elavl2 Xenopus tropicalis ENSXETG00000009387 I 0.901
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.849
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.825
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 0.770
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 0.770
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 0.770
Elavl2 Dipodomys ordii ENSDORG00000010437 I 0.770
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 0.770
LOC708195 Macaca mulatta ENSMMUG00000010038 I 0.770
ELAVL2 Homo sapiens ENSG00000107105 D 0.770
ELAVL2 Equus caballus ENSECAG00000020142 I 0.770
Elavl2 Mus musculus ENSMUSG00000008489 I 0.770
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 0.770
ELAVL2 Sorex araneus ENSSARG00000005702 I 0.770
ELAVL2 Sus scrofa ENSSSCG00000005130 I 0.770
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 0.770
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 0.770
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 0.770
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 0.770
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 0.770
ELAVL2 Canis familiaris ENSCAFG00000001688 I 0.770
ELAVL2 Echinops telfairi ENSETEG00000006134 I 0.770
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 0.770
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 0.770
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.765
AAI70539 Xenopus laevis AAI70539 I 0.765
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.765
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.765
AAA96943 Xenopus laevis AAA96943 I 0.765
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.765
AAH94189 Xenopus laevis AAH94189 I 0.765
Q91903 Xenopus laevis Q91903 I 0.765
CAA59430 Xenopus laevis CAA59430 I 0.761
ELAVL2 Takifugu rubripes ENSTRUG00000007867 I 0.754
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.750
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.749
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.746
ENSPPYG00000009583 Pongo pygmaeus ENSPPYG00000009583 N 0.744
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.742
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.742
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.737
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.737
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.737
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.737
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.737
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.737
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.737
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.737
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.737
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.737
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.737
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.737
Elavl4 Mus musculus ENSMUSG00000028546 I 0.737
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.737
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.737
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.737
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.737
ELAVL4 Homo sapiens ENSG00000162374 D 0.737
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.737
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.737
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.737
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.737
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.737
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.737
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.737
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.737
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.737
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.737
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.737
LOC100051268 Equus caballus ENSECAG00000022284 I 0.737
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.737
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.737
ELAVL1 Echinops telfairi ENSETEG00000012985 I 0.733
ELAVL1 Procavia capensis ENSPCAG00000016012 I 0.733
ELAVL1 Cavia porcellus ENSCPOG00000011884 I 0.733
ENSCHOG00000006810 Choloepus hoffmanni ENSCHOG00000006810 I 0.733
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.732
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.732
ELAVL2 Taeniopygia guttata ENSTGUG00000001349 I 0.732
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.732
CBU92440 Xenopus laevis CBU92440 I 0.732
AAH99348 Xenopus laevis AAH99348 I 0.732
AAA96945 Xenopus laevis AAA96945 I 0.732
CBF67567 Xenopus laevis CBF67567 I 0.732
elavl4 Danio rerio ENSDARG00000045639 I 0.730
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.728
elavl2 Danio rerio ENSDARG00000040732 I 0.728
ELAVL2 Procavia capensis ENSPCAG00000014998 I 0.725
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.711
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.711
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.711
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.711
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.711
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.711
elavl3 Danio rerio ENSDARG00000014420 I 0.711
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.711
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.711
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.711
ELAVL3 Homo sapiens ENSG00000196361 I 0.711
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.711
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.711
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.704
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.703
AAI69769 Xenopus laevis AAI69769 I 0.703
Q91584 Xenopus laevis Q91584 I 0.703
AAA96944 Xenopus laevis AAA96944 I 0.703
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.701
Elavl3 Mus musculus ENSMUSG00000003410 I 0.701
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.701
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.701