CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPA2B1
(
Tupaia belangeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTBEG00000003219
T41706_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
HNRNPA2B1
M024_0.6
Homo sapiens
DUAGGGW
RNAcompete
Ray et al.(2013)
RNCMPT00024
0.800
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000002785
RRM
10
78
LFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDLQAKSRGFGFVTFSSMAEVDAAVTARPLSIDGRVVE
ENSTBEP00000002785
RRM
98
168
LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIYDWRSGKKRGFGLVTFDDHDPVGKTALQKYHTINRHNTEVR
Links
Other
RRM
family RBPs
Other
Tupaia belangeri
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPA2B1
Gorilla gorilla
ENSGGOG00000017072
I
0.821
HNRNPA2B1
Loxodonta africana
ENSLAFG00000006902
I
0.821
ENSMEUG00000001084
Macropus eugenii
ENSMEUG00000001084
I
0.821
HNRNPA2B1
Myotis lucifugus
ENSMLUG00000007578
I
0.821
HNRNPA2B1
Homo sapiens
ENSG00000122566
D
0.821
HNRNPA2B1
Taeniopygia guttata
ENSTGUG00000002869
I
0.821
HNRNPA2B1
Dasypus novemcinctus
ENSDNOG00000012928
I
0.821
Hnrnpa2b1
Dipodomys ordii
ENSDORG00000005482
I
0.821
LOC100068539
Equus caballus
ENSECAG00000000782
I
0.821
HNRNPA2B1
Macaca mulatta
ENSMMUG00000003619
I
0.821
HNRNPA2B1
Monodelphis domestica
ENSMODG00000000603
I
0.821
HNRNPA2B1
Pteropus vampyrus
ENSPVAG00000006296
I
0.821
Hnrnpa2b1
Rattus norvegicus
ENSRNOG00000011175
I
0.821
ENSSTOG00000006202
Spermophilus tridecemlineatus
ENSSTOG00000006202
I
0.821
HNRNPA2B1
Pan troglodytes
ENSPTRG00000019002
I
0.821
ENSPPYG00000017715
Pongo pygmaeus
ENSPPYG00000017715
I
0.821
Hnrnpa2b1
Mus musculus
ENSMUSG00000004980
I
0.821
HNRNPA2B1
Ornithorhynchus anatinus
ENSOANG00000009159
I
0.821
HNRNPA2B1
Oryctolagus cuniculus
ENSOCUG00000026859
I
0.821
ENSCJAG00000021872
Callithrix jacchus
ENSCJAG00000021872
I
0.821
HNRNPA2B1
Echinops telfairi
ENSETEG00000018577
I
0.821
ROA2_BOVIN
Bos taurus
ENSBTAG00000005726
I
0.821
HNRNPA2B1
Tursiops truncatus
ENSTTRG00000000709
I
0.821
Ame_R000626
Ailuropoda melanoleuca
Ame_R000626
I
0.821
HNRNPA2B1
Canis familiaris
ENSCAFG00000002885
I
0.821
LOC100401647
Callithrix jacchus
ENSCJAG00000007908
I
0.821
ENSMEUG00000014479
Macropus eugenii
ENSMEUG00000014479
I
0.814
HNRNPA2B1
Meleagris gallopavo
ENSMGAG00000010635
I
0.814
D4A1X0_RAT
Rattus norvegicus
ENSRNOG00000021254
I
0.814
HNRNPA2B1
Anolis carolinensis
ENSACAG00000012992
I
0.814
HNRNPA2B1
Choloepus hoffmanni
ENSCHOG00000013832
I
0.814
Q5ZME1_CHICK
Gallus gallus
ENSGALG00000011036
I
0.814
ENSSSCG00000015836
Sus scrofa
ENSSSCG00000015836
I
0.807
ENSSSCG00000012503
Sus scrofa
ENSSSCG00000012503
I
0.789
ENSSTOG00000009092
Spermophilus tridecemlineatus
ENSSTOG00000009092
I
0.786
hnrnpa2b1
Xenopus tropicalis
ENSXETG00000012170
I
0.772
ENSSSCG00000016710
Sus scrofa
ENSSSCG00000016710
I
0.766
AAA49948
Xenopus laevis
AAA49948
I
0.766
AAH46692
Xenopus laevis
AAH46692
I
0.766
P51989
Xenopus laevis
P51989
I
0.766
CBF67577
Xenopus laevis
CBF67577
I
0.766
CBU92450
Xenopus laevis
CBU92450
I
0.766
P51990
Xenopus laevis
P51990
I
0.752
AAH43750
Xenopus laevis
AAH43750
I
0.752
AAB59951
Xenopus laevis
AAB59951
I
0.752
AAI06633
Xenopus laevis
AAI06633
I
0.752
ENSSSCG00000013607
Sus scrofa
ENSSSCG00000013607
I
0.738
HNRNPA2B1
Vicugna pacos
ENSVPAG00000010417
I
0.731
ENSBTAG00000020849
Bos taurus
ENSBTAG00000020849
I
0.725
LOC516616
Bos taurus
ENSBTAG00000002284
I
0.724
ENSSSCG00000013557
Sus scrofa
ENSSSCG00000013557
I
0.723
ENSSSCG00000013561
Sus scrofa
ENSSSCG00000013561
I
0.723