LOC516616 (Bos taurus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSBTAG00000002284 T34770_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.871
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.721
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.721
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.721
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000014774 RRM 11 80
ENSBTAP00000014774 RRM 102 171

Links

Other RRM family RBPs
Other Bos taurus RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.871
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.871
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.871
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.871
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.871
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.871
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.871
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.871
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.871
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.871
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.871
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.871
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.871
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.871
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.871
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.871
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.871
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.871
LOC100068539 Equus caballus ENSECAG00000000782 I 0.871
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.871
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.871
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.871
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.864
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.864
HNRNPA2B1 Anolis carolinensis ENSACAG00000012992 I 0.864
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.864
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.864
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.864
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.864
ENSSSCG00000015836 Sus scrofa ENSSSCG00000015836 I 0.857
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.857
ENSSSCG00000013607 Sus scrofa ENSSSCG00000013607 I 0.857
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.857
ENSSTOG00000009092 Spermophilus tridecemlineatus ENSSTOG00000009092 I 0.850
D4A1X0_RAT Rattus norvegicus ENSRNOG00000021254 I 0.838
AAH46692 Xenopus laevis AAH46692 I 0.836
CBU92450 Xenopus laevis CBU92450 I 0.836
P51989 Xenopus laevis P51989 I 0.836
AAA49948 Xenopus laevis AAA49948 I 0.836
CBF67577 Xenopus laevis CBF67577 I 0.836
hnrnpa2b1 Xenopus tropicalis ENSXETG00000012170 I 0.836
AAI06633 Xenopus laevis AAI06633 I 0.814
P51990 Xenopus laevis P51990 I 0.814
AAB59951 Xenopus laevis AAB59951 I 0.814
AAH43750 Xenopus laevis AAH43750 I 0.814
ENSSSCG00000013557 Sus scrofa ENSSSCG00000013557 I 0.790
ENSSSCG00000013561 Sus scrofa ENSSSCG00000013561 I 0.790
HNRNPA2B1 Vicugna pacos ENSVPAG00000010417 I 0.786
ENSSSCG00000016710 Sus scrofa ENSSSCG00000016710 I 0.785
ENSBTAG00000020849 Bos taurus ENSBTAG00000020849 I 0.783
ENSBTAG00000011195 Bos taurus ENSBTAG00000011195 I 0.769
LOC538435 Bos taurus ENSBTAG00000038680 I 0.755
ENSSSCG00000012503 Sus scrofa ENSSSCG00000012503 I 0.731
HNRNPA2B1 Tupaia belangeri ENSTBEG00000003219 I 0.724