XM_002892349.1 (Arabidopsis lyrata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh2_kg.1__710__AT1G07350.1 T44497_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__710__AT1G07350.1 RRM 76 146

Links

Other RRM family RBPs
Other Arabidopsis lyrata RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G07350 Arabidopsis thaliana AT1G07350-TAIR-G N 0.972
MDP0000238655 Malus x domestica MDP0000238655 N 0.775
GSVIVG00024805001 Vitis vinifera GSVIVG00024805001 N 0.761
LjB08M07.70.nc Lotus japonicus LjB08M07.70.nc N 0.732
GRMZM2G073567 Zea mays GRMZM2G073567 N 0.732
29751.m001798 Ricinus communis 29751.m001798 N 0.732
PK25868.1 Cannabis sativa PK25868.1 N 0.718
Glyma18g07500.1 Glycine max Glyma18g07500.1 N 0.718
BGIOSIBCE010473 Oryza indica BGIOSIBCE010473 N 0.704
mgf018316m Mimulus guttatus mgf018316m N 0.704
mgf000980m Mimulus guttatus mgf000980m N 0.704
B9GIV6_POPTR Populus trichocarpa POPTR_0001s25520 N 0.704
LOC_Os03g15890 Oryza sativa LOC_Os03g15890 N 0.704
Sb01g040100 Sorghum bicolor Sb01g040100 N 0.704
Glyma01g36670.1 Glycine max Glyma01g36670.1 N 0.704
Glyma08g45200.1 Glycine max Glyma08g45200.1 N 0.704
mgf010666m Mimulus guttatus mgf010666m N 0.704