PK25868.1 (Cannabis sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PK25868.1 T31766_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK25868.1 RRM 62 132

Links

Other RRM family RBPs
Other Cannabis sativa RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29751.m001798 Ricinus communis 29751.m001798 N 0.901
B9HP82_POPTR Populus trichocarpa POPTR_0009s04640 N 0.873
B9GIV6_POPTR Populus trichocarpa POPTR_0001s25520 N 0.873
Glyma18g07500.1 Glycine max Glyma18g07500.1 N 0.873
GSVIVG00024805001 Vitis vinifera GSVIVG00024805001 N 0.859
Glyma08g45200.1 Glycine max Glyma08g45200.1 N 0.845
LjB08M07.70.nc Lotus japonicus LjB08M07.70.nc N 0.845
MDP0000238655 Malus x domestica MDP0000238655 N 0.831
Cucsa.146830 Cucumis sativus Cucsa.146830 N 0.789
mg018590m Mimulus guttatus mg018590m N 0.775
Sb01g040100 Sorghum bicolor Sb01g040100 N 0.761
BRADI1G67145 Brachypodium distachyon BRADI1G67145 N 0.761
LOC_Os03g15890 Oryza sativa LOC_Os03g15890 N 0.746
BGIOSIBCE010473 Oryza indica BGIOSIBCE010473 N 0.746
GRMZM2G073567 Zea mays GRMZM2G073567 N 0.732
GSVIVG00019390001 Vitis vinifera GSVIVG00019390001 N 0.732
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.718
XM_002892349.1 Arabidopsis lyrata fgenesh2_kg.1__710__AT1G07350.1 N 0.718
30190.m011248 Ricinus communis 30190.m011248 N 0.718
MDP0000140238 Malus x domestica MDP0000140238 N 0.718
ppa011480m Prunus persica ppa011480m N 0.704
PK05232.1 Cannabis sativa PK05232.1 N 0.704
PDK_20s1416111g002 Phoenix dactylifera PDK_20s1416111g002 N 0.704
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.704
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.704
AT1G07350 Arabidopsis thaliana AT1G07350-TAIR-G N 0.704
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.704
Glyma10g41320.1 Glycine max Glyma10g41320.1 N 0.704
mgf011871m Mimulus guttatus mgf011871m N 0.704