B9GIV6_POPTR (Populus trichocarpa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 POPTR_0001s25520 T45424_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s25520.1 RRM 46 116

Links

Other RRM family RBPs
Other Populus trichocarpa RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9HP82_POPTR Populus trichocarpa POPTR_0009s04640 N 0.930
PK25868.1 Cannabis sativa PK25868.1 N 0.873
Glyma08g45200.1 Glycine max Glyma08g45200.1 N 0.859
Glyma18g07500.1 Glycine max Glyma18g07500.1 N 0.859
29751.m001798 Ricinus communis 29751.m001798 N 0.859
GSVIVG00024805001 Vitis vinifera GSVIVG00024805001 N 0.845
LjB08M07.70.nc Lotus japonicus LjB08M07.70.nc N 0.831
MDP0000238655 Malus x domestica MDP0000238655 N 0.831
Cucsa.146830 Cucumis sativus Cucsa.146830 N 0.803
BGIOSIBCE010473 Oryza indica BGIOSIBCE010473 N 0.761
LOC_Os03g15890 Oryza sativa LOC_Os03g15890 N 0.761
GRMZM2G073567 Zea mays GRMZM2G073567 N 0.761
Sb01g040100 Sorghum bicolor Sb01g040100 N 0.761
mg018590m Mimulus guttatus mg018590m N 0.746
BRADI1G67145 Brachypodium distachyon BRADI1G67145 N 0.732
gw1.19.297.1 Selaginella moellendorfii gw1.19.297.1 N 0.718
XM_002892349.1 Arabidopsis lyrata fgenesh2_kg.1__710__AT1G07350.1 N 0.704
GSVIVG00019390001 Vitis vinifera GSVIVG00019390001 N 0.704