MDP0000238655 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000238655 T57480_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000238655 RRM 43 113

Links

Other RRM family RBPs
Other Malus x domestica RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma18g07500.1 Glycine max Glyma18g07500.1 N 0.873
GSVIVG00024805001 Vitis vinifera GSVIVG00024805001 N 0.845
Glyma08g45200.1 Glycine max Glyma08g45200.1 N 0.845
B9GIV6_POPTR Populus trichocarpa POPTR_0001s25520 N 0.831
29751.m001798 Ricinus communis 29751.m001798 N 0.831
B9HP82_POPTR Populus trichocarpa POPTR_0009s04640 N 0.831
PK25868.1 Cannabis sativa PK25868.1 N 0.831
LjB08M07.70.nc Lotus japonicus LjB08M07.70.nc N 0.817
Cucsa.146830 Cucumis sativus Cucsa.146830 N 0.775
XM_002892349.1 Arabidopsis lyrata fgenesh2_kg.1__710__AT1G07350.1 N 0.775
Sb01g040100 Sorghum bicolor Sb01g040100 N 0.761
LOC_Os03g15890 Oryza sativa LOC_Os03g15890 N 0.761
BGIOSIBCE010473 Oryza indica BGIOSIBCE010473 N 0.761
AT1G07350 Arabidopsis thaliana AT1G07350-TAIR-G N 0.746
GRMZM2G073567 Zea mays GRMZM2G073567 N 0.732
mg018590m Mimulus guttatus mg018590m N 0.732
MDP0000140238 Malus x domestica MDP0000140238 N 0.718
PK15963.1 Cannabis sativa PK15963.1 N 0.718
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.718
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.718
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.718
BRADI1G67145 Brachypodium distachyon BRADI1G67145 N 0.718
GSVIVG00019390001 Vitis vinifera GSVIVG00019390001 N 0.704
ppa011480m Prunus persica ppa011480m N 0.704
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.704