Sb01g040100 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb01g040100 T45904_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb01g040100.1 RRM 49 119
Sb01g040100.2 RRM 44 114
Sb01g040100.3 RRM 44 114
Sb01g040100.4 RRM 44 114

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE010473 Oryza indica BGIOSIBCE010473 N 0.930
LOC_Os03g15890 Oryza sativa LOC_Os03g15890 N 0.930
GRMZM2G073567 Zea mays GRMZM2G073567 N 0.930
BRADI1G67145 Brachypodium distachyon BRADI1G67145 N 0.915
GSVIVG00024805001 Vitis vinifera GSVIVG00024805001 N 0.817
B9HP82_POPTR Populus trichocarpa POPTR_0009s04640 N 0.803
29751.m001798 Ricinus communis 29751.m001798 N 0.803
Glyma08g45200.1 Glycine max Glyma08g45200.1 N 0.789
B9GIV6_POPTR Populus trichocarpa POPTR_0001s25520 N 0.761
PK25868.1 Cannabis sativa PK25868.1 N 0.761
MDP0000238655 Malus x domestica MDP0000238655 N 0.761
LjB08M07.70.nc Lotus japonicus LjB08M07.70.nc N 0.761
mg018590m Mimulus guttatus mg018590m N 0.761
Glyma18g07500.1 Glycine max Glyma18g07500.1 N 0.761
PDK_20s1416111g002 Phoenix dactylifera PDK_20s1416111g002 N 0.746
GSVIVG00019390001 Vitis vinifera GSVIVG00019390001 N 0.732
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.732
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.732
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.732
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.732
MDP0000140238 Malus x domestica MDP0000140238 N 0.718
Cucsa.146830 Cucumis sativus Cucsa.146830 N 0.704
gw1.19.297.1 Selaginella moellendorfii gw1.19.297.1 N 0.704
ppa011480m Prunus persica ppa011480m N 0.704
XM_002892349.1 Arabidopsis lyrata fgenesh2_kg.1__710__AT1G07350.1 N 0.704