mgf018316m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf018316m T53765_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf018316m RRM 59 129

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mgf010666m Mimulus guttatus mgf010666m N 1.000
mgf000980m Mimulus guttatus mgf000980m N 1.000
GSVIVG00005197001 Vitis vinifera GSVIVG00005197001 N 0.915
Glyma01g36670.1 Glycine max Glyma01g36670.1 N 0.887
Medtr5g023040 Medicago truncatula Medtr5g023040 N 0.873
Glyma02g04980.1 Glycine max Glyma02g04980.1 N 0.873
Cucsa.043980 Cucumis sativus Cucsa.043980 N 0.873
Medtr8g088990 Medicago truncatula Medtr8g088990 N 0.873
Glyma16g23010.1 Glycine max Glyma16g23010.1 N 0.873
29784.m000370 Ricinus communis 29784.m000370 N 0.859
cassava35282.valid.m1 Manihot esculenta cassava35282.valid.m1 N 0.859
B9MX89_POPTR Populus trichocarpa POPTR_0005s10780 N 0.859
ppa010685m Prunus persica ppa010685m N 0.859
MDP0000304811 Malus x domestica MDP0000304811 N 0.845
PK15963.1 Cannabis sativa PK15963.1 N 0.845
PDK_20s1771821g002 Phoenix dactylifera PDK_20s1771821g002 N 0.845
MDP0000285029 Malus x domestica MDP0000285029 N 0.817
XM_002867008.1 Arabidopsis lyrata scaffold_700530.1 N 0.803
AT4G35785 Arabidopsis thaliana AT4G35785-TAIR-G N 0.789
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.761
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.746
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.746
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.746
LOC_Os06g50890 Oryza sativa LOC_Os06g50890 N 0.746
BGIOSIBCE023334 Oryza indica BGIOSIBCE023334 N 0.746
30190.m011248 Ricinus communis 30190.m011248 N 0.732
Glyma08g45200.1 Glycine max Glyma08g45200.1 N 0.718
PK05232.1 Cannabis sativa PK05232.1 N 0.718
LjB08M07.70.nc Lotus japonicus LjB08M07.70.nc N 0.718
GSVIVG00019390001 Vitis vinifera GSVIVG00019390001 N 0.718
ppa011480m Prunus persica ppa011480m N 0.718
gw1.27.117.1 Physcomitrella patens gw1.27.117.1 N 0.704
mgf011871m Mimulus guttatus mgf011871m N 0.704
Glyma18g07500.1 Glycine max Glyma18g07500.1 N 0.704
SB10G030460 Sorghum bicolor Sb10g030460 N 0.704
XM_002892349.1 Arabidopsis lyrata fgenesh2_kg.1__710__AT1G07350.1 N 0.704
GSVIVG00024805001 Vitis vinifera GSVIVG00024805001 N 0.704
29751.m001798 Ricinus communis 29751.m001798 N 0.704
e_gw1.234.40.1 Physcomitrella patens e_gw1.234.40.1 N 0.704