XM_002876116.1 (Arabidopsis lyrata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh2_kg.5__1629__AT3G52660.1 T44548_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__1629__AT3G52660.1 RRM 93 163
fgenesh2_kg.5__1629__AT3G52660.1 RRM 173 244
fgenesh2_kg.5__1629__AT3G52660.1 RRM 269 339

Links

Other RRM family RBPs
Other Arabidopsis lyrata RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G52660 Arabidopsis thaliana AT3G52660-TAIR-G N 0.958
ppa004785m Prunus persica ppa004785m N 0.730
B9IIU5_POPTR Populus trichocarpa POPTR_0016s08010 N 0.726
MDP0000851531 Malus x domestica MDP0000851531 N 0.726
MDP0000181657 Malus x domestica MDP0000181657 N 0.721
PK04414.1 Cannabis sativa PK04414.1 N 0.712
cassava21693.m1 Manihot esculenta cassava21693.m1 N 0.710
cassava19191.valid.m1 Manihot esculenta cassava19191.valid.m1 N 0.710
cassava21692.m1 Manihot esculenta cassava21692.m1 N 0.710
B9HC85_POPTR Populus trichocarpa POPTR_0006s22890 N 0.706
cassava29630.valid.m1 Manihot esculenta cassava29630.valid.m1 N 0.702
cassava19192.valid.m1 Manihot esculenta cassava19192.valid.m1 N 0.701